Job Description P76577 Confidence 100.00% Date Thu Jan 5 12:24:46 GMT 2012 Rank 10 Aligned Residues 343 % Identity 21% Template d2olua2 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.90

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		255	.	.	.	.	260	.	.	.	.	.	.																	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	P	L	F	S	R	M	M	L	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	S	D	K	I	T	T	T	L	D	A	G	L	Q	R	R	L	E	E	L	A	Q	N	W	K	G	R	L	P	P	R	S	S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Y	N	S	Y	V	N	F	V	K	S	E	L	X	N	N	K	A	F	K	D	E	N	L	G	N	V	L	Q	S	G	I	K	I	Y	T	N	X	D	K	D	V	Q	K	T	L	Q	N	D	V	D	N	G	S	F	Y	K	N	K	D	Q	Q	V	G	A	T	I	L	D	S	K	T	G	G	L	V	A	I	S	G
Template Known Secondary structure		G	G												T	T	S	T	T	T	T	T	S						T	T	S																								S			S	S	T	T										T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																.																						.
Query SS confidence																																.																						.
Query Sequence		S	V	D	L	N	D	D	S	R	F	G	H	V	D	M	V	N	S	I	R	S	P	G	S	V	L	K	P	F	V	.	Y	G	L	A	L	D	E	G	L	I	H	P	A	S	L	L	Q	D	V	P	R	.	R	T	G	D	Y	R	P	G	N	F	D	S	G	F	H	G	P	I	S	M	S	E	A	L	V	R	S
Query Conservation																																.																						.
Alig confidence										.	.	.																				.																						.
Template Conservation										.	.	.
Template Sequence		G	R	D	F	K	D	V	V	.	.	.	N	R	N	Q	A	T	D	P	H	P	T	G	S	S	L	K	P	F	L	A	Y	G	P	A	I	E	N	X	K	W	A	T	N	H	A	I	Q	D	E	S	S	Y	Q	V	D	G	S	T	F	R	N	Y	D	T	K	S	H	G	T	V	S	I	Y	D	A	L	R	Q	S
Template Known Secondary structure		S	T	T			T	T	T	.	.	.	S			T	T	T	S					G	G	G	G					T								T				T	T	B						S	S				T	T						T	T	S														T	T
Template Predicted Secondary structure										.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.				.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.			440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.																															.	.	.	.	.
Query SS confidence																																													.	.																															.	.	.	.	.
Query Sequence		L	N	L	P	A	V	Q	V	L	E	A	Y	G	P	K	R	F	A	A	K	L	R	N	V	G	L	P	L	Y	L	P	N	G	A	A	P	N	L	S	L	I	L	G	.	.	G	A	G	A	K	L	E	D	M	A	A	A	Y	T	A	F	A	R	H	G	K	A	G	K	L	R	L	Q	P	D	.	.	.	.	.
Query Conservation																																													.	.																															.	.	.	.	.
Alig confidence																																													.	.																															.	.	.	.	.
Template Conservation
Template Sequence		F	N	I	P	A	L	K	A	W	Q	S	V	K	Q	N	A	G	N	D	A	P	K	K	F	A	A	K	L	G	L	N	Y	E	G	D	I	G	P	S	E	V	L	G	G	S	A	S	E	F	S	P	T	Q	L	A	S	A	F	A	A	I	A	N	G	G	T	Y	N	N	A	H	S	I	Q	K	V	V	T	R	D
Template Known Secondary structure																	T		T	T									T	T				S	S								T	T		T	T																	T	T	S						B								T	T
Template Predicted Secondary structure
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
							470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.		.	.	.	500	.	.	.		.	.	.	.	.	.	510	.	.	.	.	.															.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																												.								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																												.								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	D	P	L	L	E	R	P	L	M	S	S	G	A	A	W	I	I	R	R	I	M	A	D	E	A	Q	P	.	L	P	D	S	A	L	P	.	R	V	A	P	L	A	W	K	T	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	Y	R	D	A	W	A	I	G	V	N	A
Query Conservation		.	.	.	.	.																												.								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																												.								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	T	I	E	Y	D	H	T	S	H	K	A	X	S	D	Y	T	A	Y	X	L	A	E	X	L	K	G	T	F	K	P	Y	G	S	A	Y	G	H	G	V	S	G	V	N	X	G	A	K	T	G	T	G	T	Y	G	A	E	T	Y	S	Q	Y	N	L	P	D	N	A	A	K	D	V	W	I	N	G	F	T	P
Template Known Secondary structure		S													S														G	G	G	S	T	T	S	T	T	T	T				S	S																				T	T			T	T			S									S
Template Predicted Secondary structure
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.						.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.		.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure																			.	.	.	.	.																																					.
Query SS confidence																			.	.	.	.	.																																					.
Query Sequence		R	Y	V	I	G	I	W	T	G	R	P	D	G	T	P	V	V	.	.	.	.	.	G	Q	F	G	F	A	S	A	V	P	L	L	N	Q	V	N	N	I	L	L	S	R	S	A	N	L	P	E	D	P	R	P	N	S	V	T	.	R	G	V	I	C	W	P	G	G	Q	S	L	P	E	G	D	G	N	C	R	R
Query Conservation																			.	.	.	.	.																																					.
Alig confidence																			.	.	.	.	.																				.	.																.												.	.	.
Template Conservation																																											.	.																												.	.	.
Template Sequence		Q	Y	T	X	S	V	W	X	G	F	S	K	V	K	Q	Y	G	E	N	S	F	V	G	H	S	Q	Q	E	Y	P	Q	F	L	Y	E	N	V	X	S	K	I	.	.	S	S	R	D	G	E	D	F	K	R	P	S	S	V	S	G	S	I	P	S	I	N	V	S	G	S	Q	.	.	.	D	N	N	T	T	N	R
Template Known Secondary structure		S										S	S			G	G	G	T	T	S			S					T														.	.	S			S								T	T			S		T	T					T	T			.	.	.		S	S	B
Template Predicted Secondary structure																																											.	.																												.	.	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.			.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.				.	.	.	.	.	.	.
		603	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		690	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions