|   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | |
|
. | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | R | A | E | A | A | R | N | K | V | L | E | R | M | A | V | Q | G | V | W | S | R | E | Q | V | K | E | S | R | E | E | P | I | W | L | A | P | R | Q | M | P | Q | L | A | P | L | F | S | R | M | M | L | G | K | . |
. |
S | K | S | D | K | I | T | T | T | L | D | A | G | L | Q | R | R | L | E | E | L | A | Q | N |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |   |
|   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | T | L | A | E | A | Q | E | R | M | Y | D | Y | L | A | Q | R | D | N | V | S | A | K | E | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | N | E | A | T | Q | K | F | Y | R | D | L | A | A | K | E | I | E | N | G | G | Y | K | I | T | T | T | I | D | Q | K | I | H | S | A | M | Q | S | A | V | A | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
342 | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . |
  |
  |   |
291 | . | . | . | . | . | . | . | . | |
|
|
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | |
. | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | K | G | R | L | P | P | R | S | . |
. |
. |
S | L | A | M | I | V | V | D | H | T | D | M | R | V | R | G | W | V | G | S | V | D | L | N | D | D | S | R | F | G | H | V | D | M | V | N | S | I | R | S | P | G | S | V | L | K | P | F | V | . |
Y | G | L | A | L | D | E | G | L | I | H | P | A | S | L | L | Q | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   | . | . | . |   |   |
|   |
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|   |
|
|
|   | . |
|
|
|
|
|
|   |
|   |
|
|
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   | . | . | . |   |
|
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|
|   |
|
|
|   |
|   |   |
|
|   |
|   |   |   |
|
Template Sequence |   |
Y | G | Y | L | L | D | D | G | T | G | R | V | E | V | G | N | V | L | M | D | N | Q | T | G | A | I | L | G | F | V | G | G | R | N | Y | Q | E | N | Q | . |
. |
. |
N | N | H | A | F | D | T | K | R | S | P | A | S | T | T | K | P | L | L | A | Y | G | I | A | I | D | Q | G | L | M | G | S | E | T | I | L | S | N |
Template Known Secondary structure |   |
 | G | G | G | G |
|
| S | S | S | S |
|  |  |  |  |  |  |  |  | T | T | T |
| B |  |  |  |  |  |
|
| S |
| T | T | T |
|
| . | . | . |
|
| T | T | T | T |
|
| B |
|
| G | G | G | G |  |  |  |  | T |  |  |  |  |  |  | T | T | S |
|
| T | T |
|  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . |
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
409 | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | |
|
|
. | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . |
  |
  |   |
367 | . | . | 370 | . | . | . | . | . | . | . | . | . | |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | |
|
. | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | |
. | 440 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|  |  | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  | . |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Query Sequence |   |
V | P | R | R | T | G | D | Y | R | P | G | N | F | . |
D | S | G | F | H | G | P | I | S | M | S | E | A | L | V | R | S | L | N | L | P | A | V | Q | V | L | E | A | Y | G | P | K | . |
. |
R | F | A | A | K | L | R | N | V | G | L | P | L | Y | L | P | N | G | A | A | P | N | L | S | L | I | L | . |
G | G | A | G |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |
|   |
|   | . |
|   |   |   |   |
|   |
|
|   |   |   |
|
|   |   |
|   |
|
|   |
|
|   |
|   |   |   |
|
|   |   | . | . |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
| . |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
Y | P | T | N | F | A | N | G | N | P | I | M | Y | A | N | S | K | G | T | G | M | M | T | L | G | E | A | L | N | Y | S | W | N | I | P | A | Y | W | T | Y | R | M | L | R | E | N | G | V | D | V | K | G | Y | M | E | K | M | G | Y | E | I | P | E | Y | G | I | . |
. |
. |
. |
E | S | L | P | M | G | G | G | I | E |
Template Known Secondary structure |   |
S |
|
| B |
| T | T | S |
| B |
|
| B | T | T | B |
|
|
|
|  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | T | T |
|
|
| S |
|
|
|
| . | . | . | . | T | T | G | G | G | T | T | T |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
486 | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | |
|
|
|
. | . | . | . | . | . | . | . | 560 | . |
  |
  |   |
443 | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | |
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
| . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
A | K | L | E | D | M | A | A | A | Y | T | A | F | A | R | H | G | K | A | G | K | L | R | L | Q | P | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | P | L | L | E | R | P | L | M | S | S | G | A | A | W | I | I | R | R | I | M | A | D | E | A | Q | P | L | P | D | S | A | L | P | . |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | T | V | A | Q | H | T | N | G | Y | Q | T | L | A | N | N | G | V | Y | H | Q | K | H | V | I | S | K | I | E | A | A | D | G | R | V | V | Y | E | Y | Q | D | K | P | V | Q | V | Y | S | K | A | T | A | T | I | M | Q | G | L | L | R | E | V | L | S | S | R | V | T | T | T | F | K | S | N | L | T | S | L | N | P |
Template Known Secondary structure |   |
B |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |
|
|
| B | S |  |  |  |  |  |
| T | T | S |
|  |  |  |  |
|
|
|
|
|  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|
|  |  |  |  |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
562 | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . |
  |
  |   |
|
|
504 | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | |
|
|
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
R | V | A | P | L | A | W | K | T | G | T | S | Y | G | Y | R | D | A | W | A | I | G | V | N | A | R | Y | V | I | G | I | W | T | G | R | P | D | G | T | P | V | V | G | Q | F | G | F | A | S | A | V | P | L | L | N | Q | V | N | N | I | L | L | S | R | S | A | N | . |
. |
. |
L | P | E | D | P | R | P | N |
Query Conservation |   |
. | . |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |
|   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
T | L | A | N | A | D | W | I | G | K | T | G | T | T | N | Q | D | E | N | M | W | L | M | L | S | T | P | R | L | T | L | G | G | W | I | G | H | D | D | N | H | S | L | S | Q | Q | A | G | Y | S | N | N | S | N | Y | M | A | H | L | V | N | A | I | Q | Q | A | S | P | S | I | W | G | N | E | R | F | A | L | D | P |
Template Known Secondary structure |   |
 |  |  | T | S |
|
|  |  |  |  |  |
|
| T | T |
| S |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |
| T | T |
|
|
|
|
| T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | S | S |
| S |
|
|
|
|
|
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
642 | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . |
  |
  |   |
579 | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | T | R | G | V | I | C | W | P | G | G | Q | S | L | P | E | G | D | G | N | C | R | R | R | L | A | T | W | L | L | D | G | S | Q | P | P | T | L | L | L | P | E |
Query Conservation |   |
  |
|   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |   |
|
|   |   | . | . | . |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
S | V | V | K | S | E | V | L | K | S | T | G | Q | K | . |
. |
. |
P | G | K | V | S | V | E | G | K | . |
E | V | E | V | T | G | S | T | V | T | S | Y | W | A | N | K |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  | T | T | T | S | S | B | . | . | . |
|  |  |  |  |
| S | S | S | . |  |  |  |  |
|
|
|  |  |  |  |  |  | S | S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
722 | . | . | . | . | . | . | . | 730 | . | . | . | . | . | |
|
|
. | . | . | . | 740 | . | . | . | . | |
. | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 |
  |