Job Description P76577 Confidence 100.00% Date Thu Jan 5 12:24:46 GMT 2012 Rank 21 Aligned Residues 301 % Identity 17% Template d1rp5a4 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 3.00

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.								.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.
Query Sequence		T	L	D	A	G	L	Q	R	R	L	E	E	L	A	Q	N	W	K	G	R	L	P	P	R	S	S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G	S	V	D	L	N	D	D	S	R	F	.	.	.	.	.	.	.	G	H	V	D	M	V	N	S	I	R	S	P	G	S	V	L	K	P	F
Query Conservation																																																								.	.	.	.	.	.	.
Alig confidence																											.																													.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		T	I	S	S	P	L	Q	S	F	M	E	T	Q	M	D	A	F	Q	E	K	V	K	G	K	Y	.	M	T	A	T	L	V	S	A	K	T	G	E	I	L	A	T	T	Q	R	P	T	F	D	A	D	T	K	E	G	I	T	E	D	F	V	W	R	D	I	L	Y	Q	S	N	Y	E	P	G	S	T	M	K	V	M
Template Known Secondary structure																									S		.								T	T	T		B								S			B	T	T	T	T	B	T			S	S						T	T	T	S			B			G	G	G	G
Template Predicted Secondary structure																											.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.					.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		V	Y	G	L	A	L	D	E	G	L	I	H	P	A	S	L	L	Q	D	V	P	R	R	T	G	D	Y	R	.	.	.	.	P	G	N	F	D	S	G	F	H	G	P	I	S	M	S	E	A	L	V	R	S	L	N	L	P	A	V	Q	V	L	E	A	Y	G	P	K	R	F	A	A	K	L	R	N	V	G	L	P
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.
Template Conservation
Template Sequence		M	L	A	A	A	I	D	N	N	T	F	P	G	G	E	V	F	N	S	S	E	L	K	I	A	D	A	T	I	R	D	W	D	V	N	E	G	L	T	G	G	R	M	M	T	F	S	Q	G	F	A	H	S	S	N	V	G	M	T	L	L	E	Q	K	M	G	D	A	T	W	L	D	Y	L	N	R	F	K	F	G
Template Known Secondary structure										T				T	T						S					T	T										T	T	S		S													T																								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		424	.	.														.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.													470	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.														.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.														.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	G	A	A	P	N	L	S	L	I	L	G	.	G	A	G	A	K	L	E	D	M	A	A	A	Y	T	A	F	A	R	H	G	K	A	G	K	L	R	L	Q	P	D	.	.	.	.	.	.	.	.	.	.	.	.	D	P	L	L	E	R	P	L
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.														.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.														.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	T	R	F	G	L	T	D	E	Y	A	G	Q	L	P	A	D	N	I	V	N	I	A	M	S	A	F	G	Q	G	I	S	V	T	Q	T	Q	M	L	R	A	F	T	A	I	A	N	D	G	V	M	L	E	P	K	F	I	S	A	L	Y	D	P	N	D	Q	S	V	R	K	S	Q	K	E	I	V	G	N	P
Template Known Secondary structure		S					S		S	S					B				S	S								T	T	T		S		B	B														T	T	T						B								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.												500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.														.	.	.	.	520	.	.	.	.	.	.	.	.					.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		M	S	S	G	A	A	W	I	I	R	R	I	M	A	D	E	A	Q	P	L	P	D	.	.	.	.	.	.	.	.	.	.	.	S	A	L	P	R	V	A	P	L	A	W	K	T	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	Y	R	D	A	W	A	I	G	V	N	A	.	.	.	.	R
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		V	S	K	E	A	A	S	V	T	R	D	H	M	V	M	V	G	T	D	P	T	Y	G	T	M	Y	N	H	S	T	G	K	A	T	V	N	V	P	G	Q	N	V	A	L	K	S	G	T	A	E	I	A	D	E	K	N	G	G	Y	L	T	G	S	T	N	N	I	F	S	V	V	S	M	H	P	A	E	N	P	D
Template Known Secondary structure		S																			T	T	T		T	T	B		T	T	T	S	S	B	S	S		B	T	T	B												B		T	T	T	S	S	B			S	S	S	S										S	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	I	G	I	W	T	G	R	P	D	G	T	P	V	V	G	Q	F	G	F	A	S	A	V	P	L	L	N	Q	V	N	N	I	L	L	S	R	S	A	N	L	P	E	D	P	R	P	N
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		F	I	L	Y	V	T	V	Q	Q	P	E	H	Y	S	.	.	G	I	Q	L	G	E	F	A	N	P	I	L	E	R	A	S	A	M	K	E	S	L	N	L	Q	T	T	A	K	A	L	E	Q
Template Known Secondary structure										S		S	S			.	.																			T	T	T	T	T	T	T	S			G	G	G	G	S
Template Predicted Secondary structure																.	.
Template SS confidence
		583	.	.	.	.	.	.	590	.	.	.	.	.	.			.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions