Job Description P76577 Confidence 97.02% Date Thu Jan 5 12:24:46 GMT 2012 Rank 93 Aligned Residues 266 % Identity 18% Template d1onha_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.38

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		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		D	A	G	L	Q	R	R	L	E	E	L	A	Q	N	W	K	G	R	L	P	P	R	S	S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G	S	V	D	L	N	D	D	S	R	F	G	H	V	D	M	V	N	S	I	R	S	P	G	S	V	L	K	P	F	V	Y	G	L	A	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																								.	.																															.	.	.	.																				.	.	.
Template Conservation																								.	.																															.	.	.	.
Template Sequence		E	K	Q	L	A	E	V	V	A	N	T	V	T	P	L	M	K	A	Q	S	V	P	.	.	G	M	A	V	A	V	I	Y	Q	G	K	P	H	Y	Y	T	F	G	K	A	D	I	A	A	N	K	P	V	T	P	.	.	.	.	Q	T	L	F	E	L	G	S	I	S	K	T	F	T	G	V	L	G	G	D	A	I
Template Known Secondary structure																				T	T		S	.	.									T	T												T	T	T	T					T	.	.	.	.	T		B				G	G	G
Template Predicted Secondary structure																								.	.																															.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	G	L	I	H	P	A	S	L	L	Q	D	V	P	R	R	T	G	D	Y	R	P	G	N	F	D	S	G	F	H	G	P	I	S	M	S	E	A	L	V	R	S	L	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.						.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.						.
Template Sequence		A	R	G	E	I	S	L	D	D	P	V	T	.	.	.	.	.	.	.	R	Y	W	P	Q	.	L	T	G	K	Q	W	Q	G	I	R	M	L	D	L	A	T	Y	T	A	G	G	L	P	L	Q	V	P	D	E	V	T	D	N	A	S	L	L	R	F	Y	Q	N	W	Q	P	Q	W	K	P	G	T	T	R	L	Y
Template Known Secondary structure				T	S			T	T	S	B	G	G	.	.	.	.	.	.	.	G	T		T	T	.				G	G	G	T	T		B							T		S	S				S	S			T	T			S														S	S		T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.						.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
								400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.						420	.	.	.																								.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																					.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																					.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	P	A	V	Q	V	L	E	A	Y	G	P	K	R	F	A	A	K	L	R	N	.	.	.	.	.	V	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	L	P	N	G	A	A	P	N	L	S	L	I	L	G	G	A	G	A	K	L
Query Conservation		.	.	.	.	.	.																					.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																					.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	A	S	I	G	L	F	G	A	L	A	V	K	P	S	G	M	P	Y	E	Q	A	M	T	T	R	V	L	K	P	L	K	L	D	H	T	W	I	N	V	P	K	A	E	E	A	H	Y	A	W	G	Y	R	D	G	K	A	V	R	A	V	R	V	S	P	G	M	L	D	A	Q	A	Y	G	V	K	T	N	V
Template Known Secondary structure														T	G	G	G	T	S										T	T	T	T	T	T		T	T			S	S			G	G	G	G	G	G	B						T	T										S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.																			.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Query Sequence		E	D	M	A	A	A	Y	T	A	F	A	R	H	G	K	A	G	K	L	R	L	Q	P	D	D	P	L	L	E	R	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	S	G	A	A	W	I	I	R	R	I	M	A	D	E	A	Q	P	L	P	D	S	A	L	P	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation
Template Sequence		Q	D	M	A	N	W	V	M	A	N	M	A	P	E	N	V	A	D	A	S	L	K	Q	G	I	A	L	A	Q	S	R	Y	W	R	I	G	S	M	Y	Q	G	L	G	W	E	M	L	N	W	P	V	E	A	N	T	V	V	E	G	S	D	S	K	V	A	L	A	P	L	P	V	A	E	V	N	P	P	A	P	P
Template Known Secondary structure														G	G	G			S											T	S						T	T					S	S						S	S											S					T	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	P	L	A	W	K	T	G	T	S	Y	G	Y	R	D	A	W	A	I	G	V	N	A	R	Y	V	I	G	I	W	T	G	R	P	D	G	T	P	V	V	G	Q	F	G	F	A	S	A	V	P	L	L	N	Q	V	N	N	I	L
Query Conservation
Alig confidence																															.						.	.	.	.	.	.	.
Template Conservation																															.						.	.	.	.	.	.	.
Template Sequence		V	K	A	S	W	V	H	K	T	G	S	T	G	G	F	G	S	Y	V	A	F	I	P	E	K	Q	I	G	I	.	V	M	L	A	N	.	.	.	.	.	.	.	T	S	Y	P	N	P	A	R	V	E	A	A	Y	H	I	L	E	A	L
Template Known Secondary structure			S	S										S	S									G	G	G	T				.					S	.	.	.	.	.	.	.	B																		T
Template Predicted Secondary structure																															.						.	.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.								.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions