Job Description P76577 Confidence 99.87% Date Thu Jan 5 12:24:46 GMT 2012 Rank 42 Aligned Residues 240 % Identity 19% Template d1iysa_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.65

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		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		L	Q	R	R	L	E	E	L	A	Q	N	W	K	G	R	L	P	P	R	S	S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G	S	V	D	L	N	D	D	S	R	F	G	H	V	D	M	V	N	S	I	R	S	P	G	S	V	L	K	P	F	V	Y	G	L	A	L	D	E	.	.	.	G
Query Conservation																																																																														.	.	.
Alig confidence																	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	Q	Q	L	E	A	L	E	K	S	S	G	G	R	.	.	.	.	.	.	L	G	V	A	L	I	N	T	A	D	N	S	Q	I	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	D	E	R	F	A	M	C	S	T	S	K	V	M	A	A	A	A	V	L	K	Q	S	E	S	D
Template Known Secondary structure														T	S		.	.	.	.	.	.								T	T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S					G	G	G	G													T	S
Template Predicted Secondary structure																	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.					.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																						.	.	.	.																		.
Query SS confidence																																						.	.	.	.																		.
Query Sequence		L	I	H	P	A	S	L	L	Q	D	V	P	R	R	T	G	D	Y	R	P	G	N	F	D	S	G	F	H	G	P	I	S	M	S	E	A	.	.	.	.	L	V	R	S	L	N	L	P	A	V	Q	V	L	E	A	Y	G	.	P	K	R	F	A	A	K	L	R	N	V	G	L	P	L	Y	L	P	N	G	A	A
Query Conservation																																						.	.	.	.																		.
Alig confidence																				.																		.	.	.	.																		.
Template Conservation																				.
Template Sequence		K	H	L	L	N	Q	R	V	E	I	K	K	S	D	L	V	N	Y	.	N	P	I	A	E	K	H	V	N	G	T	M	T	L	A	E	L	G	A	A	A	L	Q	Y	S	D	N	T	A	M	N	K	L	I	A	H	L	G	G	P	D	K	V	T	A	F	A	R	S	L	G	D	E	T	F	R	L	D	R	T	E
Template Known Secondary structure		T	T	S	T	T							G	G	G			S		.		T	T	G	G	G	G	T	T	S														S														T	S											T	T		S	S							T
Template Predicted Secondary structure																				.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		432	.	.	.	.	.	.	.	440				.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.			500	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																																																												.	.
Query SS confidence											.	.	.																																																												.	.
Query Sequence		P	N	L	S	L	I	L	G	G	.	.	.	A	G	A	K	L	E	D	M	A	A	A	Y	T	A	F	A	R	H	G	K	A	G	K	L	R	L	Q	P	D	D	P	L	L	E	R	P	L	M	S	S	G	A	A	W	I	I	R	R	I	M	A	D	E	A	Q	P	L	P	D	.	.	S	A	L	P	R	V	A
Query Conservation											.	.	.																																																												.	.
Alig confidence											.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	L	N	T	A	I	P	G	D	P	R	D	T	T	T	P	L	A	M	A	Q	T	L	K	N	L	T	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	L	A	E	T	Q	R	A	Q	L	V	T	W	L	K	G	N	T	T	G	S	A	S	I	R	A	G	L	P	K	S	W
Template Known Secondary structure		T	G	G	G				T	T			T	T																T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S														T		S	S		T	T	T	G	G	G	G	S		T	T	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		507	.	.	510	.	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.	.	.	.				530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure											.															.	.	.
Query SS confidence											.															.	.	.
Query Sequence		P	L	A	W	K	T	G	T	S	.	Y	G	Y	R	D	A	W	A	I	G	V	N	A	R	.	.	.	Y	V	I	G	I	W	T	G	R	P	D	G	T	P	V	V	G	Q	F	G	F	A	S	A	V	P	L	L	N	Q	V	N	N
Query Conservation											.															.	.	.
Alig confidence											.															.	.	.														.	.	.
Template Conservation																																										.	.	.
Template Sequence		V	V	G	D	K	T	G	S	G	D	Y	G	T	T	N	D	I	A	V	I	W	P	E	N	H	A	P	L	V	L	V	T	Y	F	T	Q	P	E	Q	K	.	.	.	A	E	R	R	R	D	I	L	A	A	A	A	K	I	V	T	H
Template Known Secondary structure											S	T	T											S	S	S												S	S	T	T	.	.	.																T	T
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions