Job Description P76577 Confidence 100.00% Date Thu Jan 5 12:24:46 GMT 2012 Rank 16 Aligned Residues 295 % Identity 20% Template c3oc2A_ PDB info PDB header:penicillin-binding protein Chain: A: PDB Molecule:penicillin-binding protein 3; PDBTitle: crystal structure of penicillin-binding protein 3 from pseudomonas2 aeruginosa Resolution 1.97 Å

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		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.							.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		K	S	D	K	I	T	T	T	L	D	A	G	L	Q	R	R	L	E	E	L	A	Q	N	W	K	G	R	L	P	P	R	S	S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G	S	V	D	L	N	D	D	S	R	F	G	H	V	D	.	.	.	.	.	.	M	V	N	S	I	R	S	P	G
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence																																		.																																	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		P	G	K	T	L	A	L	S	I	D	L	R	L	Q	Y	L	A	H	R	E	L	R	N	A	L	L	E	N	G	A	K	A	.	G	S	L	V	I	M	D	V	K	T	G	E	I	L	A	M	T	N	Q	P	T	Y	N	P	N	N	R	R	N	L	Q	P	A	A	M	R	N	R	A	M	I	D	V	F	E	P	G
Template Known Secondary structure								B	S																					T				.								T	T	T		B								S				T	T			T	T															B	B		G
Template Predicted Secondary structure																																		.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		S	V	L	K	P	F	V	Y	G	L	A	L	D	E	G	L	I	H	P	A	S	L	L	Q	D	V	P	.	.	R	R	T	G	D	Y	R	P	G	N	F	D	S	G	F	H	G	P	I	S	M	S	E	A	L	V	R	S	L	N	L	P	A	V	Q	V	L	E	A	Y	G	P	K	R	F	A	A	K	L	R	N
Query Conservation																													.	.
Alig confidence																													.	.													.
Template Conservation																																											.
Template Sequence		S	T	V	K	P	F	S	M	S	A	A	L	A	S	G	R	W	K	P	S	D	I	V	D	V	Y	P	G	T	L	Q	I	G	R	Y	T	I	R	D	V	S	.	R	N	S	R	Q	L	D	L	T	G	I	L	I	K	S	S	N	V	G	I	S	K	I	A	F	D	I	G	A	E	S	I	Y	S	V	M	Q	Q
Template Known Secondary structure		G	G	G											T	T	S			T	T						T	T	S					T	T						S		.				S										T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		420	.	.	.	.	.	.																			.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470		.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Query Sequence		V	G	L	P	L	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	G	A	A	P	N	L	S	L	I	L	G	G	A	G	A	K	L	E	D	M	A	A	A	Y	T	A	F	A	R	H	G	K	A	G	K	L	R	L	Q	P	D	D	.	P	L	L	E	R	P	L	M	S	S
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																															.
Template Conservation																																								.
Template Sequence		V	G	L	G	Q	D	T	G	L	G	F	P	G	E	R	V	G	N	L	P	N	H	R	K	W	P	K	A	E	T	A	T	L	A	Y	G	Y	G	.	L	S	V	T	A	I	Q	L	A	H	A	Y	A	A	L	A	N	D	G	K	S	V	P	L	S	M	T	R	V	D	R	V	P	D	G	V	Q	V	I	S	P
Template Known Secondary structure		T	T	T	T	S					S		T	T					B					S	S											T	T		S	.		B	B														T	T	T						B	S	B			S	S								S
Template Predicted Secondary structure																																								.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.		.	.	.	.	500	.	.	.		.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.					.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure																	.									.																								.	.	.	.
Query SS confidence																	.									.																								.	.	.	.
Query Sequence		G	A	A	W	I	I	R	R	I	M	A	D	E	A	Q	.	P	L	P	D	S	A	L	P	.	R	V	A	P	L	A	W	K	T	G	T	S	Y	G	Y	R	D	A	W	A	I	G	V	.	.	.	.	N	A	R	Y	V	I	G	I	W	T	G	R	P	D	G	T	P	V	V	G	Q	F	G	F	A	S	A	V
Query Conservation																	.									.																								.	.	.	.
Alig confidence																	.									.																								.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.
Template Sequence		E	V	A	S	T	V	Q	G	M	L	Q	Q	V	V	E	A	Q	G	G	V	F	R	A	Q	V	P	G	Y	H	A	A	G	K	S	G	T	A	R	K	A	Y	R	S	L	F	A	G	F	A	P	A	T	D	P	R	I	A	M	V	V	V	I	D	E	P	.	.	.	.	.	.	.	.	F	G	G	L	V	S	A
Template Known Secondary structure																	S	T	T	S		G	G	G			T	T	S																							T	T	S													.	.	.	.	.	.	.	.						T
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.									.	.	.	520	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	N	Q	V	N	N	I	L	L	S	R	S	A	N	L	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	F	S	K	V	M	A	G	A	L	R	L	M	N	V	P	P	D
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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