Job Description P76577 Confidence 100.00% Date Thu Jan 5 12:24:46 GMT 2012 Rank 34 Aligned Residues 212 % Identity 17% Template c3hbrD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:oxa-48; PDBTitle: crystal structure of oxa-48 beta-lactamase Resolution 1.90 Å

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		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G	S	V	D	L	N	D	D	S	R	F	G	H	V	D	M	V	N	S	I	R	S	P	G	S	V	L	K	P	F	V	Y	G	L	A	L	D	E	G	L	I	H	P	A	S	L	L	Q	D	V	P	R	R	T	G	D	Y	R	P	G	N	F
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.										.										.																								.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.										.										.																								.	.	.	.	.	.
Template Sequence		Q	G	V	V	V	L	W	N	E	Q	Q	G	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	L	K	R	A	N	Q	A	.	F	L	P	A	S	T	F	I	P	.	N	S	L	I	A	L	D	L	G	V	V	K	D	E	H	Q	V	F	K	W	D	G	Q	.	.	.	.	.	.	T	R	D
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T	G	G	G			.				G	G	G				.									T	S	S		S	T	T			B				S		.	.	.	.	.	.			S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.										.										.																								.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.															.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	G	F	H	G	P	I	S	M	S	E	A	L	V	R	S	L	N	L	P	A	V	Q	V	L	E	A	Y	G	P	K	R	F	A	A	K	L	R	N	V	G	L	P	L	Y	L	P	N	G	A	A	P	N	L	S	L	I	L	G	G	A	G	A	K	L	E	D	M	A	A	A	Y	T	A	F	A	R	H	G
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		I	A	T	W	N	R	D	H	N	L	I	T	A	M	K	Y	S	V	V	P	V	Y	Q	E	F	A	R	Q	I	G	E	A	R	M	S	K	M	L	H	A	F	D	Y	G	N	E	D	I	S	G	N	V	D	.	S	F	W	L	D	G	G	I	R	I	S	A	T	E	Q	I	S	F	L	R	K	L	Y	H	N	K
Template Known Secondary structure		S	G	G	G	S	S		B								T	T																									T		T	T					S		T	T	.	T					S	S																	T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.			.	.	.	520	.	.	.	.	.	.					.	.	.	530	.	.	.
Predicted Secondary structure																																																											.	.											.	.	.	.
Query SS confidence																																																											.	.											.	.	.	.
Query Sequence		K	A	G	K	L	R	L	Q	P	D	D	P	L	L	E	R	P	L	M	S	S	G	A	A	W	I	I	R	R	I	M	A	D	E	A	Q	P	L	P	D	S	A	L	P	R	V	A	P	L	A	W	K	T	G	T	S	Y	.	.	G	Y	R	D	A	W	A	I	G	V	.	.	.	.	N	A	R	Y	V	I	G
Query Conservation																																																											.	.											.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.												.	.											.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	S	E	R	S	Q	R	I	V	K	Q	A	M	L	T	E	A	N	G	D	.	.	.	.	.	.	.	.	Y	I	I	R	A	K	T	G	Y	S	T	R	I	E	P	K	I	G	W	W	V	G	W	V	E	L	D	D	N	V	W	F	F	A
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S												T						S	S	.	.	.	.	.	.	.	.												S	S	S	S												S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		181																	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.									.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	T	G	R	P	D	G	T	P	V	V	G	Q	F	G	F	A	S	A	V	P	L	L	N	Q	V	N	N	I	L
Query Conservation
Alig confidence											.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		M	N	M	D	M	P	T	S	D	.	.	.	.	.	.	G	L	G	L	R	Q	A	I	T	K	E	V	L	K	Q	E
Template Known Secondary structure							S	S	G	G	.	.	.	.	.	.	G	T	T													T
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions