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Job DescriptionP76577
Confidence98.07%DateThu Jan 5 12:24:46 GMT 2012
Rank77Aligned Residues209
% Identity16%Templatec3czdA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glutaminase kidney isoform; PDBTitle: crystal structure of human glutaminase in complex with l-glutamate
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   334.....340.........350.........360.........370...... ...380.........390.........400 .
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Query Sequence  VNSIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRP. GNFDSGFHGPISMSEALVRSLNLP. . . . . . . . . . . A
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Template Sequence  TKVPFCLQSCVKPLKYAIAVND. . LGTEYVHRYVGKEPSGLRLFLNEDDKPHNPMVNAGAIVVTSLIKQGVNNAEKFDYV
Template Known Secondary structure  TTS

GGGG..
TTS
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   278.280.........290......... 300.........310.........320.........330.........340.........350.....
 
   402....... 410.........420.........430......... 440.........450.........
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Query Sequence  VQVLEAYG. . . . . . . . . . . . . . . . . . . . . PKRFAAKLRNVGLPLYLPNGAAPNLSLILG. GAGAKLEDMAAAYTAFARHG
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Template Sequence  MQFLNKMAGNEYVGFSNATFQSERESGDRNFAIGYYLKEKKCFPEGTDMVGILDFYFQLCSIEVTCESASVMAATLANGG
Template Known Secondary structure  TTT




TT
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   359360.........370.........380.........390.........400.........410.........420.........430........
 
   460.........470.........480.........490.........500.........510.........520.........530.........
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Query Sequence  KAGKLRLQPDDPLLERPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPLAWKTGTSYGYRDAWAIGVNARYVIGIWTGRP
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Template Sequence  F. . . . . . . . . CPITGERVLSPEAVRNTLSLMHSCGMYDFSGQFAFHVGLPAKSGVA. . . . GGILLVVPNVMGMMCWS. . .
Template Known Secondary structure  B.........
TTT

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   439 440.........450.........460.........470.........480..... ....490.........500..
 
   540.........550.........560...
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Query Sequence  DGTPVVGQFGFASAVPLLNQVNNI
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Template Sequence  . . . PPLDKMGNSVKGIHFCHDLVS
Template Known Secondary structure  ...S
TTSSB
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   503......510.........520...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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