 |
Job Description | P76577 | Confidence | 54.84% | Date | Thu Jan 5 12:24:46 GMT 2012 |
Rank | 151 | Aligned Residues | 80 |
% Identity | 21% | Template | c2yuzA_ |
PDB info |
PDB header:immune system | Chain: A: PDB Molecule:myosin-binding protein c, slow-type; |
PDBTitle: solution structure of 4th immunoglobulin domain of slow2 type myosin-binding protein c
|
Resolution | UNK |
|
 |
  |   |
685 | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 750 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
G | H | D | A | Q | L | P | L | Q | L | T | G | V | R | D | G | A | I | I | K | R | L | P | G | A | A | E | A | T | L | P | L | Q | S | S | G | G | A | G | E | R | W | W | F | L | N | G | E | P | L | T | E | R | G | R | N | V | T | L | H | L | T | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | G | D | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
| . | . | . |   |   |
|   |   |   |   |
|   |
|   |
|   | . |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |
|
Template Sequence |   |
G | S | S | G | S | S | G | L | K | I | L | T | P | L | T | D | Q | T | V | . |
. |
. |
N | L | G | K | E | I | C | L | K | C | E | I | S | . |
E | N | I | P | G | K | W | T | K | N | G | L | P | V | Q | E | S | D | R | L | K | V | V | Q | K | G | R | I | H | K | L | V | I | A | N | A | L | T | E | D | E | G | D | Y |
Template Known Secondary structure |   |
|
| S | S | S |
|
|
|
|
| S | B |
|
|
|
|  |  |  | . | . | . |  | T | T | S |
|
|
|  |  |  |  |
| S | . | S |
|
|
|  |  |  |  |  | T | T |  |  |
|
|
|
| S | S |  |  |  |  |  |
| S | S |  |  |  |  |  |  | S | S |
|
| G | G | G |
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  | . | . | . |  |
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
  |   |
752 | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | L | V | M | D | D | V | G | Q | I | A | T | V | K | F | V | M |
Query Conservation |   |
  |
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   | . |   |
|   |   |   |
|   |
|
|   |
|   |
|
Template Sequence |   |
V | F | A | P | . |
D | A | Y | N | V | T | L | P | A | K | V | H | V |
Template Known Secondary structure |   |
 |  |  |  | . | S | S | S |
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | |
. | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|