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Job DescriptionP76577
Confidence96.81%DateThu Jan 5 12:24:46 GMT 2012
Rank98Aligned Residues167
% Identity18%Templatec2wzzA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: amp-c beta-lactamase (pseudomonas aeruginosa)in complex2 with compound m-03
Resolution1.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   279280.........290.........300.........310.........320.........330.........340.........350... ..
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Query Sequence  GLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMVNSIRSPGSVLKPFVYGLAL. . . DE
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Template Sequence  RLKALVDAAVQPVMKANDIPG. LAVAISLKGEPHYFSY. GLASKEDGRRVTP. . . . ETLFEIGSVSKTFTATLAGYALTQ
Template Known Secondary structure  TT
S.TT.BS
TTT

B

T....T

GGGT
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   33......40.........50... ......60......... 70.........80.. .......90.........100......
 
   356...360.........370.........380.........390.........
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Query Sequence  GLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEALVRSLNL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DKMRLDDRAS. . . . . . . QHWP. ALQGSRFDGISLLDLATYTAGGLPLQFPDSVQKDQAQIRDYYRQWQPTYAPGSQRLYS
Template Known Secondary structure  TS

TTSBGG.......GG
G.GGTTSGGGG
BTT
SS


SS

TT

S



SS
TTT


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   107..110...... ...120 .........130.........140.........150.........160.........170........
 
   400.........410......... 420.........430.. .......440........
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Query Sequence  . . . . . PAVQVLEAYGPKRFAAKLRN. . . . . VGLPLYLPNGAAP. . . . . . . . . . . . . . . . . . . . . NLSLILGGAGAKLEDM
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Template Sequence  NPSIGLFGYLAARSLGQPFERLMEQQVFPALGLEQTHLDVPEAALAQYAQGYGKDDRPLRVGPGPLDAEGYGVKTSAADL
Template Known Secondary structure  TTS
TTT
SSSS

GGGGGGB


B
GGG
B





TT

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   179180.........190.........200.........210.........220.........230.........240.........250........
 
   449450.........
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Query Sequence  AAAYTAFARHG
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Template Sequence  LRFVDANLHPE
Template Known Secondary structure 
GG
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   259260.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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