Job Description P76577 Confidence 99.93% Date Thu Jan 5 12:24:46 GMT 2012 Rank 35 Aligned Residues 255 % Identity 16% Template c2wuqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:beta-lactamase regulatory protein blab; PDBTitle: crystal structure of blab protein from streptomyces cacaoi Resolution 1.80 Å

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		276	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure					.																																																																												.
Query SS confidence					.																																																																												.
Query Sequence		L	D	A	.	G	L	Q	R	R	L	E	E	L	A	Q	N	W	K	G	R	L	P	P	R	S	S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G	S	V	D	L	N	D	D	S	R	F	G	H	V	D	M	V	N	S	I	R	S	P	G	S	V	L	K	P	F	V	Y	G	L	A	L	.
Query Conservation					.																																																																												.
Alig confidence					.													.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	S	E	S	L	L	R	E	L	R	D	A	L	H	E	.	.	.	.	.	.	G	G	L	T	G	S	F	L	V	R	D	L	Y	T	G	E	E	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	D	T	E	L	P	T	A	S	L	V	K	L	P	L	A	L	A	T	L	E
Template Known Secondary structure																		.	.	.	.	.	.	T	T										T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T						G	G	G	G
Template Predicted Secondary structure																		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
				354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.					.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure		.	.																																	.							.	.	.	.
Query SS confidence		.	.																																	.							.	.	.	.
Query Sequence		.	.	D	E	G	L	I	H	P	A	S	L	L	Q	D	V	P	R	R	T	G	D	Y	R	P	G	N	F	D	S	G	F	H	G	.	P	I	S	M	S	E	.	.	.	.	A	L	V	R	S	L	N	L	P	A	V	Q	V	L	E	A	Y	G	P	K	R	F	A	A	K	L	R	N	V	G	L	P	L	Y	L
Query Conservation		.	.																																	.							.	.	.	.
Alig confidence		.	.																																	.							.	.	.	.
Template Conservation
Template Sequence		R	I	R	L	G	E	V	D	G	A	Q	Q	I	E	V	A	P	G	R	I	T	T	P	G	P	T	G	L	S	R	F	R	H	P	A	R	V	A	V	D	D	L	L	Y	L	S	T	S	V	S	D	G	T	A	S	D	A	L	F	E	I	T	P	P	A	Q	V	E	Q	M	V	R	E	W	G	F	R	D	L	T
Template Known Secondary structure						T	S	S		T	T												S	S	S			G	G	G	G		S	S																S													S												T	T			S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.												.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	N	G	A	A	P	N	L	S	L	I	L	G	G	A	G	.	.	.	.	.	.	.	.	.	.	.	A	K	L	E	D	M	A	A	A	Y	T	A	F	A	R	H	G	K	A	G	K	L	R	L	Q	P	D	D	P	L	L	E	R	P	L	M	S	S	G	A	A	W	I	I	R	R	I	M	A	D	E	A	Q
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	H	S	M	R	E	L	G	T	S	G	R	G	H	R	V	P	Q	L	D	V	A	R	A	N	T	G	T	A	R	A	F	V	D	L	L	E	A	L	W	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	T	G	P	A	L	P	P	E	P	A	A	R	L	R	E	L	M	A	A	N	L	L
Template Known Secondary structure				S		T	T					S	B	T	T		S	S	G	G	G	B	T	T	T	S																	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G																				T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.														.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		496	.	.			.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.				.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure					.	.																														.	.	.
Query SS confidence					.	.																														.	.	.
Query Sequence		P	L	P	.	.	D	S	A	L	P	R	V	A	P	L	A	W	K	T	G	T	S	Y	G	Y	R	D	A	W	A	I	G	V	N	.	.	.	A	R	Y	V	I	G	I	W	T	G	R	P	D	G	T	P	V	V	G	Q	F	G	F	A	S	A	V	P	L	L	N	Q	V	N	N	I	L	L	S
Query Conservation					.	.																														.	.	.
Alig confidence					.	.																														.	.	.																					.
Template Conservation																																																											.
Template Sequence		R	H	R	L	A	P	D	F	A	S	D	A	A	T	W	S	S	K	T	G	T	L	L	N	L	R	H	E	V	G	V	V	E	H	A	D	G	Q	V	F	A	V	A	V	L	T	E	S	Q	V	P	A	D	S	Q	P	G	.	A	E	A	L	M	A	Q	V	A	R	R	L	R	D	R	L	R	E
Template Known Secondary structure			S	S	S						B	T	T											T	T											T	T	S												S	S			S					.
Template Predicted Secondary structure																																																											.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions