Job Description P76577 Confidence 99.84% Date Thu Jan 5 12:24:46 GMT 2012 Rank 44 Aligned Residues 240 % Identity 18% Template c2ov5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:carbapenemase; PDBTitle: crystal structure of the kpc-2 carbapenemase Resolution 1.85 Å

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		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		E	L	A	Q	N	W	K	G	R	L	P	P	R	S	S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G	S	V	D	L	N	D	D	S	R	F	G	H	V	D	M	V	N	S	I	R	S	P	G	S	V	L	K	P	F	V	Y	G	L	A	L	.	.	.	D	E	G	L	I	H	P	A	S
Query Conservation																																																																						.	.	.
Alig confidence															.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation															.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	F	A	K	L	E	Q	D	F	G	G	S	.	.	I	G	V	Y	A	M	D	T	G	S	G	A	T	V	S	Y	R	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	P	L	C	S	S	F	K	G	F	L	A	A	A	V	L	A	R	S	Q	Q	Q	A	G	L	L	D	T
Template Known Secondary structure												T	S		.	.								T	T	T							S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G															S	S	T	T	S	T	T
Template Predicted Secondary structure															.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.					.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.															.
Query SS confidence																																		.	.	.	.															.
Query Sequence		L	L	Q	D	V	P	R	R	T	G	D	Y	R	P	G	N	F	D	S	G	F	H	G	P	I	S	M	S	E	A	L	V	.	.	.	.	R	S	L	N	L	P	A	V	Q	V	L	E	A	Y	.	G	P	K	R	F	A	A	K	L	R	N	V	G	L	P	L	Y	L	P	N	G	A	A	P	N	L	S	L	I
Query Conservation																																		.	.	.	.															.
Alig confidence																			.															.	.	.	.															.
Template Conservation																			.
Template Sequence		P	I	R	Y	G	K	N	A	L	V	P	W	S	P	I	S	E	.	K	Y	L	T	T	G	M	T	V	A	E	L	S	A	A	A	V	Q	Y	S	D	N	A	A	A	N	L	L	L	K	E	L	G	G	P	A	G	L	T	A	F	M	R	S	I	G	D	T	T	F	R	L	D	R	W	E	L	E	L	N	S	A
Template Known Secondary structure							G	G	G			S	S						.		T	T	T	T														S													T	T												T	T		S	S		B			S		T	T	G	G	G
Template Predicted Secondary structure																			.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		438	.	440	.	.				.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.			500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure							.	.	.																																																										.	.
Query SS confidence							.	.	.																																																										.	.
Query Sequence		L	G	G	A	G	.	.	.	A	K	L	E	D	M	A	A	A	Y	T	A	F	A	R	H	G	K	A	G	K	L	R	L	Q	P	D	D	P	L	L	E	R	P	L	M	S	S	G	A	A	W	I	I	R	R	I	M	A	D	E	A	Q	P	L	P	D	.	.	S	A	L	P	R	V	A	P	L	A	W	K	T
Query Conservation							.	.	.																																																										.	.
Alig confidence							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	G	D	A	R	D	T	S	S	P	R	A	V	T	E	S	L	Q	K	L	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	A	L	A	A	P	Q	R	Q	Q	F	V	D	W	L	K	G	N	T	T	G	N	H	R	I	R	A	A	V	P	A	D	W	A	V	G	D	K	T
Template Known Secondary structure			T	T			T	T																T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S														T		S	S		T	T	T	G	G	G	G	S		S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.						.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		G	T	S	Y	G	Y	R	D	A	W	A	I	G	V	.	.	.	.	.	N	A	R	Y	V	I	G	I	W	T	G	R	P	D	G	T	P	V	V	G	Q	F	G	F	A	S	A	V	P	L	L	N	Q	V	N	N	I	L
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.																	.	.	.
Template Conservation																																					.	.	.
Template Sequence		G	T	C	G	V	Y	G	T	A	N	D	Y	A	V	V	W	P	T	G	R	A	P	I	V	L	A	V	Y	T	R	A	P	N	K	D	.	.	.	D	K	H	S	E	A	V	I	A	A	A	A	R	L	A	L	E	G	L
Template Known Secondary structure					S	S	T	T											T	T	S												S	S	T	T	.	.	.																			T
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions