Job Description P76577 Confidence 99.85% Date Thu Jan 5 12:24:46 GMT 2012 Rank 43 Aligned Residues 240 % Identity 20% Template c2j7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tll2115 protein; PDBTitle: structure of pbp-a Resolution 1.90 Å

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		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		A	G	L	Q	R	R	L	E	E	L	A	Q	N	W	K	G	R	L	P	P	R	S	S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G	S	V	D	L	N	D	D	S	R	F	G	H	V	D	M	V	N	S	I	R	S	P	G	S	V	L	K	P	F	V	Y	G	L	A	L	.	.	.	D
Query Conservation																																																																														.	.	.
Alig confidence															.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation															.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	L	Q	Q	Q	I	Q	Q	L	V	S	R	.	.	.	.	.	Q	P	N	L	T	A	G	L	Y	F	F	N	L	D	S	G	A	S	L	N	V	G	G	D	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	A	A	S	T	I	K	F	P	I	L	V	A	F	F	K	A	V	D
Template Known Secondary structure														S	.	.	.	.	.	S	T	T										T	T	T							B	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	G
Template Predicted Secondary structure															.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.					.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.																			.
Query SS confidence																																							.	.	.	.																			.
Query Sequence		E	G	L	I	H	P	A	S	L	L	Q	D	V	P	R	R	T	G	D	Y	R	P	G	N	F	D	S	G	F	H	G	P	I	S	M	S	E	.	.	.	.	A	L	V	R	S	L	N	L	P	A	V	Q	V	L	E	A	Y	G	.	P	K	R	F	A	A	K	L	R	N	V	G	L	P	L	Y	L	P	N	G
Query Conservation																																							.	.	.	.																			.
Alig confidence																																							.	.	.	.																			.
Template Conservation
Template Sequence		E	G	R	V	T	L	Q	E	R	L	T	M	R	P	D	L	I	A	P	E	A	G	T	L	Q	Y	Q	K	P	N	S	Q	Y	A	A	L	E	V	A	E	L	M	I	T	I	S	D	N	T	A	T	N	M	I	I	D	R	L	G	G	A	A	E	L	N	Q	Q	F	Q	E	W	G	L	E	N	T	V	I	N	N
Template Known Secondary structure		T	T	S	S		S	S	S						T	T	T				S	S		S	G	G	G	S		T	T															S													T	T												T	T		T	T		B			S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.		.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		A	A	P	N	L	S	L	I	L	G	G	A	G	A	K	L	E	D	M	A	A	A	Y	T	A	F	A	R	H	G	K	A	G	K	L	R	L	Q	P	D	D	P	L	L	E	R	P	L	M	S	S	G	A	A	W	I	I	R	R	I	M	A	D	E	A	Q	P	L	P	.	D	S	A	L	P	R	V	A	P	L
Query Conservation																																																																							.
Alig confidence								.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation								.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	P	D	M	K	.	.	.	G	T	N	T	T	S	P	R	D	L	A	T	L	M	L	K	I	G	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	L	S	P	R	S	R	D	R	L	L	D	I	M	R	R	T	V	T	N	T	L	L	P	A	G	L	G	K	G	A	T	I
Template Known Secondary structure			T	T		T	T	.	.	.																			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S													T	S		S			S	S	G	G	G	G	S		T	T
Template Predicted Secondary structure								.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.				.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		A	W	K	T	G	T	S	Y	G	Y	R	D	A	W	A	I	G	V	N	.	.	.	A	R	Y	V	I	G	I	W	T	G	R	P	D	G	T	P	V	V	G	Q	F	G	F	A	S	A	V	P	L	L	N	Q	V	N	N	I	L	L	S
Query Conservation																					.	.	.
Alig confidence																					.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		A	H	K	T	G	D	I	G	I	V	V	G	D	A	G	M	V	D	M	P	N	G	Q	R	Y	V	A	A	M	M	V	K	R	P	Y	.	.	.	.	.	.	.	.	N	D	P	R	G	S	E	L	I	R	Q	V	S	R	M	V	Y	Q
Template Known Secondary structure									S	S											T	T	S												S	T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.									.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions