Return to main results Retrieve Phyre Job Id

Job DescriptionP76577
Confidence30.32%DateThu Jan 5 12:24:46 GMT 2012
Rank200Aligned Residues83
% Identity16%Templatec2edjA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:roundabout homolog 2; PDBTitle: solution structure of the fifth ig-like domain from human2 roundabout homolog 2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   684.....690.........700.........710.........720. ........730.........740....... ..750.
Predicted Secondary structure 























.


















...........


Query SS confidence 





































.

























. . . . . . . . . . .



Query Sequence  YGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGG. AGERWWFLNGEPLTERGRNVTLHLTD. . . . . . . . . . . KGDY
Query Conservation            
  
  
                     .     
 


                ........... 
  
Alig confidence 



















...














.

























...........



Template Conservation 
      

 
        
...  
    
 
   
 
 
   
                       
      
 
 
Template Sequence  GSSGSSGPPIILQGPANQTL. . . AVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTY
Template Known Secondary structure 

SS

SS




...SSS


SS

SSSSSS
SS

TT

S

TTT

Template Predicted Secondary structure 










...
























Template SS confidence 















































































   1........10.........20 .........30.........40.........50.........60.........70.......
 
   752.......760. ........
Predicted Secondary structure 



.
Query SS confidence 









.







Query Sequence  QLLVMDDVGQ. IATVKFVM
Query Conservation   
 
 
  
 .   
   
Alig confidence 









.







Template Conservation   
 
 
  
       
 
Template Sequence  TCVATSSSGETSWSAVLDV
Template Known Secondary structure 
SS


B

Template Predicted Secondary structure 


Template SS confidence 


















   78.80.........90......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions