Return to main results Retrieve Phyre Job Id

Job DescriptionP76577
Confidence58.15%DateThu Jan 5 12:24:46 GMT 2012
Rank141Aligned Residues81
% Identity16%Templatec2ec8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: crystal structure of the exctracellular domain of the receptor2 tyrosine kinase, kit
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   681........690.........700.........710.........720.........730.........740....... ..750.....
Predicted Secondary structure 













































.....


Query SS confidence 


































































. . . . .







Query Sequence  CPPYGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRNVTLHLTD. . . . . KGDYQLLV
Query Conservation               
  
  
                          
 


                ..... 
   
 
Alig confidence 






















...













...























.....







Template Conservation    
     
 

 
        
...  
  
 
 
   
... 
 
   
  
        
 
  
   
 
 
 
 
Template Sequence  CVLLLLLEPSPPSIHPGKSDLIV. . . RVGDEIRLLCTDPG. . . FVKWTFEILDETNENKQNEWITEKAEATNTGKYTCTN
Template Known Secondary structure 











S

S
...
TTS

TT...SSS


SSSS

STT
Template Predicted Secondary structure 








...



...












Template SS confidence 















































































   12.......20.........30.... .....40........ .50.........60.........70.........80.....
 
   756...760.......
Predicted Secondary structure 



Query SS confidence 











Query Sequence  MDDVGQIATVKF
Query Conservation   
  
    
  
Alig confidence 











Template Conservation   
       
 
Template Sequence  KHGLSNSIYVFV
Template Known Secondary structure  TTS

Template Predicted Secondary structure 



Template SS confidence 











   100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions