 |
Job Description | P76577 | Confidence | 57.97% | Date | Thu Jan 5 12:24:46 GMT 2012 |
Rank | 143 | Aligned Residues | 70 |
% Identity | 20% | Template | c2e6qA_ |
PDB info |
PDB header:structural protein | Chain: A: PDB Molecule:obscurin-like protein 1; |
PDBTitle: solution structure of the ig-like domain (615-713) from2 human obscurin-like protein 1
|
Resolution | UNK |
|
 |
  |   |
686 | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | D | A | Q | L | P | L | Q | L | T | G | V | R | D | G | A | I | I | K | R | L | P | G | A | A | E | A | T | L | P | L | Q | S | S | G | G | A | G | E | R | W | W | F | L | N | G | E | P | L | T | E | R | G | . |
. |
. |
. |
. |
. |
. |
. |
R | N | V | T | L | H | L | T | D | K | G | D | Y | Q | L | L | V | M | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   | . | . | . |
|
|   |   |
|   |
|   |
|   |
|
| . |   |   |   |   |
|   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |
Template Sequence |   |
S | G | S | S | G | T | A | R | L | V | A | G | L | E | D | V | Q | V | Y | . |
. |
. |
D | G | E | D | A | V | F | S | L | D | L | S | . |
T | I | I | Q | G | T | W | F | L | N | G | E | E | L | K | S | N | E | P | E | G | Q | V | E | P | G | A | L | R | Y | R | I | E | Q | K | G | L | Q | H | R | L | I | L | H | A |
Template Known Secondary structure |   |
| S |
|
| S |
|
|
|  |  |  |
|
|
|
|  |  |  |  | . | . | . | T | T |
|  |  |  |  |  |  |  |  | S | . | S |
|
|
|
|  |  |  |  | S | S |
| B |
|
| S | S |
|
|
| T | T | S |
| T | T | S |
|  |  |  |  |
|
| B | T | T |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
|
. | . | . | . | . | . | . | . | 30 | . | . | . | |
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
758 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
D | V |
Query Conservation |   |
  |   |
Alig confidence |   |
|
|
Template Conservation |   |
|   |
Template Sequence |   |
V | K |
Template Known Secondary structure |   |
|
|
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
79 | 80 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|