Job Description P76577 Confidence 97.51% Date Thu Jan 5 12:24:46 GMT 2012 Rank 88 Aligned Residues 126 % Identity 12% Template c1tvfA_ PDB info PDB header:penicillin binding Chain: A: PDB Molecule:penicillin binding protein 4; PDBTitle: crystal structure of penicillin-binding protein 4 (pbp4)2 from staphylococcus aureus Resolution 2.00 Å

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		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.				.	.	.	.	.	360
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		L	E	E	L	A	Q	N	W	K	G	R	L	P	P	R	S	S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G	S	V	D	L	N	D	D	S	R	F	G	H	V	D	M	V	N	S	I	R	S	P	G	S	V	L	K	P	F	V	Y	G	L	A	L	D	.	.	.	E	G	L	I	H	P
Query Conservation																																																																									.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	A	A	N	Q	Y	G	Y	A	G	L	S	A	A	Y	E	P	T	S	A	V	N	V	S	Q	T	G	Q	L	L	Y	Q	Y	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	K	W	N	P	A	S	M	T	K	L	M	T	M	Y	L	T	L	E	A	V	N	K	G	Q	L	S	L
Template Known Secondary structure								T	T		T	T			G	G	G			S							T	T	S	B						S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			B			G	G	G															T	T	S	S		T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.					.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.							410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure													.	.	.																						.	.	.	.																		.	.	.	.	.	.
Query SS confidence													.	.	.																						.	.	.	.																		.	.	.	.	.	.
Query Sequence		A	S	L	L	Q	D	V	P	R	R	T	.	.	.	G	D	Y	R	P	G	N	F	D	S	G	F	H	G	P	I	S	M	S	E	A	.	.	.	.	L	V	R	S	L	N	L	P	A	V	Q	V	L	E	A	Y	G	.	.	.	.	.	.	P	K	R	F	A	A	K	L	R	N	V	G	L	P	L
Query Conservation													.	.	.																						.	.	.	.																		.	.	.	.	.	.
Alig confidence													.	.	.																						.	.	.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	T	V	T	M	T	N	K	E	Y	I	M	S	T	L	P	E	L	S	N	T	K	L	Y	P	G	Q	V	W	T	I	A	D	L	L	Q	I	T	V	S	N	S	S	N	A	A	A	L	I	L	A	K	K	V	S	K	N	T	S	D	F	V	D	L	M	N	N	K	A	K	A	I	G	M	K	N
Template Known Secondary structure		T													T	T		T	T	S							T	T															S														S	S	S															T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions