Job Description P76577 Confidence 99.60% Date Thu Jan 5 12:24:46 GMT 2012 Rank 61 Aligned Residues 240 % Identity 17% Template c1i2sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: beta-lactamase from bacillus licheniformis bs3 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	Q	N	W	K	G	R	L	P	P	R	S	S	L	A	M	I	V	V	D	H	T	D	M	R	V	R	G	W	V	G	S	V	D	L	N	D	D	S	R	F	G	H	V	D	M	V	N	S	I	R	S	P	G	S	V	L	K	P	F	V	Y	G	L	A	L	D	E	G	L	I	H	P	A	S	L	L	Q
Query Conservation
Alig confidence															.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	F	A	K	L	E	E	Q	F	D	A	K	.	.	L	G	I	F	A	L	D	T	G	T	N	R	T	V	T	Y	R	P	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	A	F	A	S	T	I	K	A	L	T	V	G	V	L	L	Q	Q	K	S	I	E	D	L	N	Q	R	I
Template Known Secondary structure												T			.	.								T	T	T	T						S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G													S		T	G	G	G	G
Template Predicted Secondary structure															.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.					.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure																															.	.	.	.															.
Query SS confidence																															.	.	.	.															.
Query Sequence		D	V	P	R	R	T	G	D	Y	R	P	G	N	F	D	S	G	F	H	G	P	I	S	M	S	E	A	L	V	.	.	.	.	R	S	L	N	L	P	A	V	Q	V	L	E	A	Y	.	G	P	K	R	F	A	A	K	L	R	N	V	G	L	P	L	Y	L	P	N	G	A	A	P	N	L	S	L	I	L	G	G
Query Conservation																															.	.	.	.															.
Alig confidence																															.	.	.	.															.
Template Conservation
Template Sequence		T	Y	T	R	D	D	L	V	N	Y	N	P	I	T	E	K	H	V	D	T	G	M	T	L	K	E	L	A	D	A	S	L	R	Y	S	D	N	T	A	Q	N	L	I	L	K	Q	I	G	G	P	E	S	L	K	K	E	L	R	K	I	G	D	E	V	T	N	P	E	R	F	E	P	E	L	N	E	V	N	P	G
Template Known Secondary structure					G	G	G			S			T	T	G	G	G	S	T	T	T																											T	T												T	T			S							T	T	G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		441				.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.			.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure			.	.	.																																																										.	.
Query SS confidence			.	.	.																																																										.	.
Query Sequence		A	.	.	.	G	A	K	L	E	D	M	A	A	A	Y	T	A	F	A	R	H	G	K	A	G	K	L	R	L	Q	P	D	D	P	L	L	E	R	P	L	M	S	S	G	A	A	W	I	I	R	R	I	M	A	D	E	A	Q	P	L	P	.	.	D	S	A	L	P	R	V	A	P	L	A	W	K	T	G	T	S
Query Conservation			.	.	.																																																										.	.
Alig confidence			.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	Q	D	T	S	T	A	R	A	L	A	T	S	L	Q	A	F	A	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	L	P	S	E	K	R	E	L	L	I	D	W	M	K	R	N	T	T	G	D	A	L	I	R	A	G	V	P	E	G	W	E	V	A	D	K	T	G	A	G
Template Known Secondary structure				T	T																T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S														T		S	S		T	T	T					S		T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		516	.	.	.	520	.	.	.	.	.	.						.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		Y	G	Y	R	D	A	W	A	I	G	V	.	.	.	.	.	N	A	R	Y	V	I	G	I	W	T	G	R	P	D	G	T	P	V	V	G	Q	F	G	F	A	S	A	V	P	L	L	N	Q	V	N	N	I	L
Query Conservation													.	.	.	.	.
Alig confidence			.										.	.	.	.	.																	.	.	.
Template Conservation			.																															.	.	.
Template Sequence		S	.	Y	G	T	R	N	D	I	A	I	I	W	P	P	K	G	D	P	V	V	L	A	V	L	S	S	R	D	K	K	D	.	.	.	A	K	Y	D	D	K	L	I	A	E	A	T	K	V	V	L	K	A	L
Template Known Secondary structure		T	.	T	T											S	S	S												S	S	T	T	.	.	.					T
Template Predicted Secondary structure			.																															.	.	.
Template SS confidence
		240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions