Job Description P75892 Confidence 0.89% Date Thu Jan 5 12:15:42 GMT 2012
Rank 65 Aligned Residues 97
% Identity 12% Template c2ksfA_
PDB info
PDB header: transferaseChain: A: PDB Molecule: sensor protein kdpd;
PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor kdpd, center for structures of3 membrane proteins (csmp) target 4312c
Resolution UNK
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
172 . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
D S W M A V M T V L C I G L V A V F T R G M I Q R L L I L V G L I V A C L L Y G V M T N V L G L G K A V D F T L V S H A A W F G L P H F S T P A F N G Q A M M L
Query Conservation  
                                                                                                                                                 
Alig confidence  
Template Conservation  
                                                                                                   
Template Sequence  
G S V V A A A L S A V I T L I A M Q W L M A F D A A N L V M L Y L L G V V V V A L F Y G R W P S V V A T V I N V V S F D L F F I A P R G T L A V S D V Q Y L L T
Template Known Secondary structure  
S S T T S S S S S S S T T S S S T T S S
Template Predicted Secondary structure  
Template SS confidence  
   
401 . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480
 
   
252 . . . . . . . 260 . . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
I A P V A V I L V A E N L G H L K
Query Conservation  
                     
Alig confidence  
Template Conservation  
                 
Template Sequence  
F A V M L T V G L V I G N L T A G
Template Known Secondary structure  
Template Predicted Secondary structure  
Template SS confidence  
   
481 . . . . . . . . 490 . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]