 |
| Job Description | P75892 | | Confidence | 0.92% | Date | Thu Jan 5 12:15:42 GMT 2012 |
| Rank | 57 | Aligned Residues | 28 |
| % Identity | 21% | Template | c1rpuA_ |
| PDB info |
PDB header:rna binding protein/rna | Chain: A: PDB Molecule:19 kda protein; |
PDBTitle: crystal structure of cirv p19 bound to sirna
|
| Resolution | 2.50 Å |
|
| | |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
H | W | Q | L | K | S | T | S | T | E | S | G | V | V | A | P | D | E | R | L | P | F | A | Q | T | A | V | M |
| Query Conservation | |
| | | | | | | | | | | | | | | |
| | | | | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
| | |
|
| | | |
|
|
|
|
|
|
|
|
|
| | |
|
|
|
| |
| Template Sequence | |
R | W | D | G | G | S | G | G | I | T | S | P | F | K | L | P | D | E | S | P | S | W | T | E | W | R | L | Y |
| Template Known Secondary structure | |
T | T |
|
| S |
|
|
| S |
|
| S | B | S | S |
|
|
|
|
|
| | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
| | |
|
|
|
|
|
|
|
|
|
|
| | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
