Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence98.45%DateThu Jan 5 11:59:24 GMT 2012
Rank254Aligned Residues155
% Identity19%Templated1xgka_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40... ......50.........60.........70.........80...
Predicted Secondary structure 











.






















Query SS confidence 






































.







































Query Sequence  TGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDA. AKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNA
Query Conservation   









 


 


  

  

 
    
     .               
                        
Alig confidence 






































.







































Template Conservation    
 







 

  
   

  
  
    
               
  
  
  
                     
Template Sequence  QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS
Template Known Secondary structure 



STTSTT

S
S
STSTTS

TT
TT
S


S
Template Predicted Secondary structure 

































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  GIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARD
Query Conservation                                                  
                

          
  
Alig confidence 













...................









































.....
Template Conservation                ...................

   
    
  

                  
   
  
 .....
Template Sequence  QAGDEIAIGKDLAD. . . . . . . . . . . . . . . . . . . AAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVR. . . . .
Template Known Secondary structure  TTS
...................S

S


GGGTSS



TTT.....
Template Predicted Secondary structure 


...................


















.....
Template SS confidence 















































































   84.....90....... ..100.........110.........120.........130.........
 
   164.....170.........180.....
Predicted Secondary structure 















Query SS confidence 





















Query Sequence  FGPRGITINVVQPGPIDTDANP
Query Conservation       
 

 
 

 
 
    
Alig confidence  ..



















Template Conservation  ..        

          
Template Sequence  . . QLGLPSTFVYAGIYNNNFTS
Template Known Secondary structure  ..TSSS

GGG
BS
Template Predicted Secondary structure  ..








Template SS confidence 





















   140.........150.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions