Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank67Aligned Residues236
% Identity28%Templated1vl8a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.07

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40......... 50.........60.........70.
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Query Sequence  MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQ. . . . . . . . . ETGATAVFTDSADRDAVIDVVR
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Template Sequence  FD. LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE
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TT
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TT
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   5. ...10.........20.........30.........40.........50.........60.........70.........80...
 
   72.......80.........90.........100.........110.........120...... ...130.........140.........
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Query Sequence  KSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGR. . ILIIGSVNGDRMPVAGMAAYAAS
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Template Sequence  KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS
Template Known Secondary structure  S











GGG

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   150.........160.........170.........180..... ....190.........200.........210.........220......
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Query Sequence  KSALQGMARGLARDFGPRGITINVVQPGPIDTDANP. . . ANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTG
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Template Sequence  KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTG
Template Known Secondary structure  GGGT


B
STTTT
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TTSS
B
GGGGSGGGTT

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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   227..230.......
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Query Sequence  AMHTIDGAFGA
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Template Sequence  QIIFVDGGWTA
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   244.....250....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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