Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank20Aligned Residues234
% Identity25%Templated1ulsa_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40....... ..50.........60.........70.........
Predicted Secondary structure 













...


















Query SS confidence 












































. . .































Query Sequence  AFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRL. . . AQETGATAVFTDSADRDAVIDVVRKSGALDIL
Query Conservation   
 









 


 


  

  

 
    
         ...           
                    
Alig confidence 












































...































Template Conservation   
 

  





 


 


  
   

 
    
                                            
Template Sequence  RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVXDVADPASVERGFAEALAHLGRLDGV
Template Known Secondary structure  TTTT
STTSTT
S
TTT


TT
SS

Template Predicted Secondary structure 


































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   80.........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  VVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARG
Query Conservation                                                      
                

         
Alig confidence 















































































Template Conservation                                                    
   
              

         
Template Sequence  VHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVAKAASEAXREKNPGSIVLTASRVYLGNLGQANYAASXAGVVGLTRT
Template Known Secondary structure 








GGG

TTT



GGGG

TT
Template Predicted Secondary structure 



















































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   160.........170.........180.........190. ........200.........210.........220.........230......
Predicted Secondary structure 





















.




















Query SS confidence 































.












































Query Sequence  LARDFGPRGITINVVQPGPIDTDANPANGPMR. DMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFG
Query Conservation   
       
 

 
 

 
 
          .          
   




  
  
 
  
  


  
 



  
Alig confidence 































.












































Template Conservation           
 

 
 

 
 
                  
  
   




  
  
 
     


  
 



  
Template Sequence  LALELGRWGIRVNTLAPGFIETRXTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT
Template Known Secondary structure  GGGT
SB

TTTSSS
T
TT
S
B
SGGGTT

S
STTTT
Template Predicted Secondary structure 








































Template SS confidence 













































































   162.......170.........180.........190.........200.........210.........220.........230.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions