Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank28Aligned Residues232
% Identity30%Templated1nffa_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50... ......60.........70......
Predicted Secondary structure 

















.....












Query SS confidence 



















































. . . . .






















Query Sequence  GAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGA. . . . . TAVFTDSADRDAVIDVVRKSGAL
Query Conservation    
 









 


 


  

  

 
    
               .....     
                 
Alig confidence 



















































.....






















Template Conservation    
 

 






 


 
 
  

  

 
    
    
                
                     
Template Sequence  GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL
Template Known Secondary structure 
TTTT
TTTSTT
S
TGGG

TT
S

Template Predicted Secondary structure 



























Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   77..80.........90.........100.........110......... 120.........130.........140.........150.....
Predicted Secondary structure 


































.





















Query SS confidence 










































.



































Query Sequence  DILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAAR. QMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQG
Query Conservation                                             .            
                

     
Alig confidence 










































.



































Template Conservation                                                          

            
  

     
Template Sequence  HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRG
Template Known Secondary structure 







B
TTTS
TT


GGGTS

TTB
Template Predicted Secondary structure 
























































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  MARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAF
Query Conservation       
       
 

 
 

 
 
                    
   




  
  
 
  
  


  
 



 
Alig confidence 


































....








































Template Conservation       
       
 

 
 

 
 
         ....    
  
   




  
  
 
     


  
 



 
Template Sequence  LTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED. . . . IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT
Template Known Secondary structure  GGGT

B
SGGGTTS
TT....
S

SSSS
B
SGGGTT

S
STTG
Template Predicted Secondary structure 












....


















Template SS confidence 















































































   163......170.........180.........190....... ..200.........210.........220.........230........
 
   236.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  GA
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  VA
Template Known Secondary structure  GG
Template Predicted Secondary structure 
Template SS confidence 

   239240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions