Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank146Aligned Residues223
% Identity22%Templated1gz6a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.38

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40..... ....50.........60........
Predicted Secondary structure 













..............










Query SS confidence 










































. . . . . . . . . . . . . .






















Query Sequence  AFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAK. . . . . . . . . . . . . . RLAQETGATAVFTDSADRDAVID
Query Conservation   
 









 


 


  

  

 
    
       ..............             
         
Alig confidence 










































..............






















Template Conservation   
 

  





 


 
 
  

  

 

   
                              
      
      
Template Sequence  RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT
Template Known Secondary structure 

TT
TTTTSTT



B
TTS
B

STT



GGG
Template Predicted Secondary structure 
























Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   6970.........80.........90.........100.........110.........120 .........130.........140.......
Predicted Secondary structure 







































.





















Query SS confidence 



















































.


























Query Sequence  VVRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQ. MPEGGRILIIGSVNGDRMPVAGMAAYA
Query Conservation                                                      .           
               
Alig confidence 



















































.


























Template Conservation                                                                   
            
 
Template Sequence  ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYS
Template Known Secondary structure  TS











GGG

T




TT
Template Predicted Secondary structure 

















































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   148.150.........160.........170.........180.........190.........200.........210.........220.......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  ASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGA
Query Conservation   

          
       
 

 
 

 
 
                    
   




  
  
 
  
  


 
Alig confidence 









































.........






















.




Template Conservation 




       

 

   




 
 

   
        .........       
  

     
 
   .   
 
Template Sequence  AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRXTETVXPE. . . . . . . . . DLVEALKPEYVAPLVLWLCHESC. EENGG
Template Known Secondary structure  TGGGT

STTTGGGS
.........S
GGGTTSTT
.


S
Template Predicted Secondary structure 













.........




.


Template SS confidence 















































































   166...170.........180.........190.........200....... ..210.........220.........230 .....
 
   228.230.....
Predicted Secondary structure 



Query SS confidence 







Query Sequence  MHTIDGAF
Query Conservation   
 



 
Alig confidence 







Template Conservation     



 
Template Sequence  LFEVGAGW
Template Known Secondary structure  TT
Template Predicted Secondary structure 



Template SS confidence 







   236...240...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions