Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank23Aligned Residues235
% Identity23%Templated1cyda_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  AFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVN
Query Conservation   
 









 


 


  

  

 
    
                    
                       
Alig confidence 















































































Template Conservation   
 

 




 
 


 
 
  
   

 
    
                                            
Template Sequence  NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN
Template Known Secondary structure 

TT
STTSTT
S
STT


TT
TT



S
Template Predicted Secondary structure 













































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   83......90.........100.........110.........120.... .....130.........140.........150.........160
Predicted Secondary structure 






























..




















Query SS confidence 









































. .



































Query Sequence  AGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEG. . GRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGL
Query Conservation                                            ..       
                

          
Alig confidence 









































..



































Template Conservation                                                      
               

          
Template Sequence  AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAM
Template Known Secondary structure 





B
GGG

TT



GGGTS

TTB
Template Predicted Secondary structure 




















































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   161........170.........180........ .190.........200.........210.........220.........230.......
Predicted Secondary structure 




















...





















Query SS confidence 



























. . .
















































Query Sequence  ARDFGPRGITINVVQPGPIDTDANPANG. . . PMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
Query Conservation 
       
 

 
 

 
 
       ...             
   




  
  
 
  
  


  
 



   
Alig confidence 



























...
















































Template Conservation          
 

 
  
   
                    

 
   
 


  
 

 
  
  


  
 



  
Template Sequence  AMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYLA
Template Known Secondary structure  GGGT

BTTT

STTSS
B
SGGGTT

SSSTTGGG
Template Predicted Secondary structure 







































Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions