Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank42Aligned Residues229
% Identity26%Templated1ae1a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50 .........60.........70........
Predicted Secondary structure 













....

















Query SS confidence 















































. . . .



























Query Sequence  AFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQE. . . . TGATAVFTDSADRDAVIDVVRKSGALDI
Query Conservation   
 









 


 


  

  

 
    
            ....        
                   
Alig confidence 















































....



























Template Conservation   
 

 






 


   
  
   

 

   
           
            
                   
Template Sequence  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD
Template Known Secondary structure 

TT
S
SSTT
S
TT



TT
TT
Template Predicted Secondary structure 


























Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   7980.........90.........100.........110........ .120.........130.........140.........150..
Predicted Secondary structure 
































......





















Query SS confidence 







































. . . . . .

































Query Sequence  LVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAA. . . . . . RQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSA
Query Conservation                                          ......             
                

  
Alig confidence 







































......

































Template Conservation                                                              
            
  

 
Template Sequence  GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGA
Template Known Secondary structure  S











TTT

TTS

GGGTS

TT
Template Predicted Secondary structure 























































Template SS confidence 















































































   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  LQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTID
Query Conservation          
       
 

 
 

 
 
                    
   




  
  
 
  
  


  
 

Alig confidence 






























......










































Template Conservation          
 
     
 

 
 

 
 
  ......         
  
   




     
 
     


  
 

Template Sequence  INQMTKSLACEWAKDNIRVNSVAPGVILQKE. . . . . . EIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWAD
Template Known Secondary structure  GGGT
SB

......STT
S
B
SGGGTT

S
S
Template Predicted Secondary structure 











......
















Template SS confidence 















































































   178.180.........190.........200........ .210.........220.........230.........240.........250.
 
   233....
Predicted Secondary structure 




Query SS confidence 




Query Sequence  GAFGA
Query Conservation 

   
Alig confidence 




Template Conservation 

   
Template Sequence  GGFTA
Template Known Secondary structure  TTGGG
Template Predicted Secondary structure 




Template SS confidence 




   265....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions