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Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank98Aligned Residues215
% Identity27%Templatec3v2hB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:d-beta-hydroxybutyrate dehydrogenase; PDBTitle: the crystal structure of d-beta-hydroxybutyrate dehydrogenase from2 sinorhizobium meliloti
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50 .........60.........70......
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Query Sequence  KTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQE. . . . . . . . . . TGATAVFTDSADRDAVIDVVRKSGAL
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Template Sequence  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXTKPSEIADXXAXVADRFGGA
Template Known Secondary structure 
S
SSTT
S


TT
SS



TT
SS
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   77..80.........90.........100.........110.........120 .........130.........140.........150.....
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Query Sequence  DILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQ. MPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQG
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Template Sequence  DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXG
Template Known Secondary structure  S








GGG

TT


GGGTS

TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  MARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAF
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Template Sequence  LTKTVALEVAESGVTVNSICPGYVLGQ. . . . . . . . . . . . . . . . PTKKFITVEQVASLALYLAGDDAAQITGTHVSXDGGW
Template Known Secondary structure  TGGGT
SB


................TT
S
B
SGGGGG

S
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   163......170.........180......... 190.........200.........210.........220......
 
   236.
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Query Sequence  GA
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Template Sequence  TA
Template Known Secondary structure  TT
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   256.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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