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Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank122Aligned Residues235
% Identity19%Templatec3t4xA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: short chain dehydrogenase/reductase family oxidoreductase from2 bacillus anthracis str. ames ancestor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50........ .60.........70.....
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Query Sequence  AFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFT. . . . . . . DSADRDAVIDVVRKSGA
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Template Sequence  QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   76...80.........90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  LDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQG
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Template Sequence  DILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLS
Template Known Secondary structure  S








GGGS
TTT

GGGTS

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   156...160.........170.........180...... ...190.........200.........210.........
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Query Sequence  MARGLARDFGPRGITINVVQPGPIDTDANPA. . . . . . . . . . . . . . . . NGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGP
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Template Sequence  LSRSLAELTTGTNVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAHLVTFLSSP
Template Known Secondary structure  TTTS

B

SSTTS



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B
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   220.........230.......
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Query Sequence  EASFVTGAMHTIDGAFGA
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Template Sequence  LSSAINGSALRIDGGLVR
Template Known Secondary structure  GGTT

S
STT
S
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   244.....250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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