Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence99.29%DateThu Jan 5 11:59:24 GMT 2012
Rank207Aligned Residues205
% Identity15%Templatec3rfxB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:uronate dehydrogenase; PDBTitle: crystal structure of uronate dehydrogenase from agrobacterium2 tumefaciens, y136a mutant complexed with nad
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  KTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIG
Query Conservation 








 


 


  

  

 
    
                    
                           
Alig confidence 



































.....




























..







Template Conservation 
 







 

  
   
   
  
    
    .....           

 
             
..        
Template Sequence  KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLD. . . . . PAGPNEECVQCDLADANAVNAMVAGCDGI. . VHLGGISV
Template Known Secondary structure  STTSTGGGSS


.....


TT

TT
TT
S..

S

S
Template Predicted Secondary structure 












.....















..




Template SS confidence 















































































   4.....10.........20.........30......... 40.........50.........60........ .70......
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  VFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGP
Query Conservation                                               
                

          
     
Alig confidence 













































































..
Template Conservation                                   
               
     
   
  

   
          ..
Template Sequence  EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLAGVSKCFGENLARMYFDKF. .
Template Known Secondary structure 


TTT

GGGGTTSBTTS
B
TT





S..
Template Predicted Secondary structure 




























..
Template SS confidence 















































































   77..80.........90.........100.........110.........120.........130.........140.........150....
 
   167..170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 

































Query SS confidence 



































































Query Sequence  RGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGA
Query Conservation    
 

 
 

 
 
                    
   




  
  
 
  
  


  
 



Alig confidence  .























...........














..














Template Conservation  .

    

   
 
          ........... 
   
 
      
..               
Template Sequence  . GQETALVRIGSCTPEPNNYRMLST. . . . . . . . . . . WFSHDDFVSLIEAVF. . RAPVLGCPVVWGASA
Template Known Secondary structure  .



B
SSS

STT...........B

..
S


S



Template Predicted Secondary structure  .














...........


..








Template SS confidence 



































































   155....160.........170........ .180.........190... ......200........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions