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Job DescriptionP39333
Confidence99.97%DateThu Jan 5 11:59:24 GMT 2012
Rank165Aligned Residues199
% Identity22%Templatec3qivA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short-chain dehydrogenase or 3-oxoacyl-[acyl-carrier- PDBTitle: crystal structure of a putative short-chain dehydrogenase or 3-2 oxoacyl-[acyl-carrier-protein] reductase from mycobacterium3 paratuberculosis atcc baa-968 / k-10
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILV
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Template Sequence  MR. FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE
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T.TTT
TTTSTT
S
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   1. .......10.........20.........30.........40.........50.........60.........70.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGL
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Template Sequence  FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRA. . VYKKMTKRGGGAIVNQSSLAKVGINGLTQQL
Template Known Secondary structure  S








GGGGG
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   80.........90.........100.........110.........120...... ...130.........140.........150.......
 
   161........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  ARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTI
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Template Sequence  SRELGGRNIRINAIAPP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . DDLVGMCLFLLSDEASWITGQIFNV
Template Known Secondary structure  TTTTT

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SGGGTT

S

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   169170.........180..... ....190.........200.........210
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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