Job Description P39333 Confidence 99.48% Date Thu Jan 5 11:59:24 GMT 2012 Rank 202 Aligned Residues 207 % Identity 13% Template c3nzoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-n-acetylglucosamine 4,6-dehydratase; PDBTitle: udp-n-acetylglucosamine 4,6-dehydratase from vibrio fischeri. Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																													.																					.	.	.	.	.	.	.	.
Query SS confidence																													.																					.	.	.	.	.	.	.	.
Query Sequence		F	T	G	K	T	V	L	I	L	G	G	S	R	G	I	G	A	A	I	V	R	R	F	V	T	D	G	.	A	N	V	R	F	T	Y	A	G	S	K	D	A	A	K	R	L	A	Q	E	.	.	.	.	.	.	.	.	T	G	A	T	A	V	F	T	D	S	A	D	R	D	A	V	I	D	V	V	R	K	S	G
Query Conservation																													.																					.	.	.	.	.	.	.	.
Alig confidence																													.																					.	.	.	.	.	.	.	.																								.
Template Conservation																																																																																	.
Template Sequence		V	S	Q	S	R	F	L	V	L	G	G	A	G	S	I	G	Q	A	V	T	K	E	I	F	K	R	N	P	Q	K	L	H	V	V	D	I	S	E	N	N	X	V	E	L	V	R	D	I	R	S	S	F	G	Y	I	N	G	D	F	Q	T	F	A	L	D	I	G	S	I	E	Y	D	A	F	I	K	A	D	G	.
Template Known Secondary structure				T							T	T	T	S												T	T			S							S																				S	S									T	T	S												.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	I	L	V	V	N	A	G	I	G	V	F	G	E	A	L	E	L	N	A	D	D	I	D	R	L	F	K	I	N	I	H	A	P	Y	H	A	S	V	E	A	A	R	Q	M	P	E	G	G	R	I	L	I	I	G	S	V	N	G	D	R	M	P	V	A	G	M	A	A	Y	A	A	S	K	S	A	L	Q
Query Conservation
Alig confidence																	.	.																														.	.	.																			.	.	.
Template Conservation																	.	.																														.	.	.																			.	.	.
Template Sequence		Q	Y	D	Y	V	L	N	L	S	A	L	K	H	V	R	.	.	S	E	K	D	P	F	T	L	X	R	X	I	D	V	N	V	F	N	T	D	K	T	I	Q	Q	S	I	D	A	.	.	.	G	A	K	K	Y	F	C	V	S	T	D	K	A	A	N	P	V	N	.	.	.	X	X	G	A	S	K	R	I	X	E
Template Known Secondary structure				S											G	G	.	.	G	G	S	S												T													T	.	.	.	T		S								S		S	S				S	.	.	.
Template Predicted Secondary structure																	.	.																														.	.	.																			.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		G	M	A	R	G	L	A	R	D	F	G	P	R	G	I	T	I	N	V	V	Q	P	G	P	I	D	T	D	A	N	P	A	N	G	P	M	R	D	M	L	H	S	L	M	A	I	K	R	.	H	G	Q	P	E	E	V	A	G	M	V	A	W	L	A	G	P	E	A	S	F	V	T	G	A	M	H	T	I	D	G
Query Conservation																																																		.
Alig confidence										.	.	.	.	.																			.	.	.	.	.	.	.											.																.	.	.
Template Conservation										.	.	.	.	.																			.	.	.	.	.	.	.																											.	.	.
Template Sequence		X	F	L	X	R	K	S	E	.	.	.	.	.	E	I	A	I	S	T	A	R	F	A	N	V	A	F	S	D	G	S	.	.	.	.	.	.	.	R	I	Q	K	N	Q	P	I	K	R	Y	F	V	T	P	Q	E	S	G	E	L	C	L	X	S	C	.	.	.	I	F	G	E	N	R	D	I	F	F	P	K	D
Template Known Secondary structure								T	T	.	.	.	.	.	T	S										B	T	T		T	T		.	.	.	.	.	.	.		T	T	T	T								B														.	.	.					T	T
Template Predicted Secondary structure										.	.	.	.	.																			.	.	.	.	.	.	.																											.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.	.	.
		234
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		331

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions