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Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank8Aligned Residues235
% Identity21%Templatec3lf2B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain oxidoreductase q9hya2; PDBTitle: nadph bound structure of the short chain oxidoreductase q9hya2 from2 pseudomonas aeruginosa pao1 containing an atypical catalytic center
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.. .......60.........70..
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Query Sequence  AFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETG. . . . . . . . . . ATAVFTDSADRDAVIDVVRK
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Template Sequence  DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT
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TT
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   73......80.........90.........100.........110.........120...... ...130.........140.........150.
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Query Sequence  SGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGR. ILIIGSVNGDRMPVAGMAAYAASKS
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Template Sequence  LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARA
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   152.......160.........170.........180......... 190.........200.........210........
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Query Sequence  ALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP. . . . . . . . . . . . . MRDMLHSLMAIKRHGQPEEVAGMVAWLAG
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Template Sequence  GVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLAS
Template Known Secondary structure  GGGT

SB
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   219220.........230.......
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Query Sequence  PEASFVTGAMHTIDGAFGA
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Template Sequence  PLSAYTTGSHIDVSGGLSR
Template Known Secondary structure  GGGTT

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   245....250.........260...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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