Job Description P39333 Confidence 100.00% Date Thu Jan 5 11:59:24 GMT 2012 Rank 43 Aligned Residues 237 % Identity 27% Template c3gvcB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable short-chain type PDBTitle: crystal structure of probable short-chain dehydrogenase-2 reductase from mycobacterium tuberculosis Resolution 2.45 Å

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		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure					.	.																																																		.	.	.	.	.
Query SS confidence					.	.																																																		.	.	.	.	.
Query Sequence		M	G	A	.	.	F	T	G	K	T	V	L	I	L	G	G	S	R	G	I	G	A	A	I	V	R	R	F	V	T	D	G	A	N	V	R	F	T	Y	A	G	S	K	D	A	A	K	R	L	A	Q	E	T	G	.	.	.	.	.	A	T	A	V	F	T	D	S	A	D	R	D	A	V	I	D	V	V	R	K	S
Query Conservation					.	.																																																		.	.	.	.	.
Alig confidence					.	.																																																		.	.	.	.	.
Template Conservation
Template Sequence		M	N	H	P	D	L	A	G	K	V	A	I	V	T	G	A	G	A	G	I	G	L	A	V	A	R	R	L	A	D	E	G	C	H	V	L	C	A	D	I	D	G	D	A	A	D	A	A	A	T	K	I	G	C	G	A	A	A	C	R	V	D	V	S	D	E	Q	Q	I	I	A	M	V	D	A	C	V	A	A	F
Template Known Secondary structure					G	G	G	T	T							T	T	T	S													T	T								S	S													T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		G	A	L	D	I	L	V	V	N	A	G	I	G	V	F	G	E	A	L	E	L	N	A	D	D	I	D	R	L	F	K	I	N	I	H	A	P	Y	H	A	S	V	E	A	A	R	Q	M	P	E	G	G	R	I	L	I	I	G	.	S	V	N	G	D	R	M	P	V	A	G	M	A	A	Y	A	A	S	K	S	A
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		G	G	V	D	K	L	V	A	N	A	G	V	V	H	L	A	S	L	I	D	T	T	V	E	D	F	D	R	V	I	A	I	N	L	R	G	A	W	L	C	T	K	H	A	A	P	R	M	I	E	R	G	G	G	A	I	V	N	L	S	S	L	A	G	Q	V	A	V	G	G	T	G	A	Y	G	M	S	K	A	G
Template Known Secondary structure		S															B		T	T	T																																T										G	G	G	T	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		L	Q	G	M	A	R	G	L	A	R	D	F	G	P	R	G	I	T	I	N	V	V	Q	P	G	P	I	D	T	D	A	N	P	.	.	.	.	.	.	A	N	G	P	M	R	D	M	L	H	S	L	M	A	I	K	R	H	G	Q	P	E	E	V	A	G	M	V	A	W	L	A	G	P	E	A	S	F	V	T	G
Query Conservation																																			.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	Q	L	S	R	I	T	A	A	E	L	R	S	S	G	I	R	S	N	T	L	L	P	A	F	V	D	T	P	M	Q	Q	T	A	M	A	M	F	D	G	A	L	G	G	A	R	S	M	I	A	R	L	Q	G	R	M	A	A	P	E	E	M	A	G	I	V	V	F	L	L	S	D	D	A	S	M	I	T	G
Template Known Secondary structure														G	G	G	T										S	B		S							T	T				S	S													S	S		B														S	G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		227	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	H	T	I	D	G	A	F	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	Q	I	A	D	G	G	T	I	A
Template Known Secondary structure							S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions