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Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank41Aligned Residues235
% Identity27%Templatec3ak4C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nadh-dependent quinuclidinone reductase; PDBTitle: crystal structure of nadh-dependent quinuclidinone reductase from2 agrobacterium tumefaciens
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50. ........60.........70.....
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Query Sequence  MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQET. . . . . GATAVFTDSADRDAVIDVVRKSGA
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Template Sequence  FD. LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGG
Template Known Secondary structure  T
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TT
TTTSTT
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T
TT


TT
TS
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   5. ...10.........20.........30.........40.........50.........60.........70.........80...
 
   76...80.........90.........100.........110........ .120.........130.........140.........150...
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Query Sequence  LDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAA. . RQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSAL
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Template Sequence  FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAV
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GGG

TT




GGGTS

TT
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   154.....160.........170.........180......... 190.........200.........210.........220.
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Query Sequence  QGMARGLARDFGPRGITINVVQPGPIDTDANPANGP. . . . . . . . . . . . MRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEA
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Template Sequence  FGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAA
Template Known Secondary structure  GGGT

SB
ST

T
TT
S
B
SGGG
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   222.......230......
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Query Sequence  SFVTGAMHTIDGAFG
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Template Sequence  RFMTGQGINVTGGVR
Template Known Secondary structure  TT

S
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   244.....250........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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