Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank38Aligned Residues235
% Identity23%Templatec2zatC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:dehydrogenase/reductase sdr family member 4; PDBTitle: crystal structure of a mammalian reductase
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.......
Predicted Secondary structure 






























.....
Query SS confidence 










































































. . . . .
Query Sequence  AFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALD. . . . .
Query Conservation   
 









 


 


  

  

 
    
                    
                  .....
Alig confidence 










































































.....
Template Conservation   
 

 






 


 


  
   

 


  
                                            
Template Sequence  PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG
Template Known Secondary structure  TTTT
SS
SSTT
S
TT



TT
S
Template Predicted Secondary structure 



























Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   78.80.........90.........100.........110.........120.........130.........140.........150..
Predicted Secondary structure  .....























































Query SS confidence  . . . . .










































































Query Sequence  . . . . . ILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSA
Query Conservation  .....                                                      
                

  
Alig confidence  .....










































































Template Conservation                                                              
            
  

  
Template Sequence  GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTA
Template Known Secondary structure 










B
GGG

TTT


GGGTS

TTB
Template Predicted Secondary structure 











































Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   153......160.........170.........180.... .....190.........200.........210.........220.........
Predicted Secondary structure 


















...


















Query SS confidence 































. . .












































Query Sequence  LQGMARGLARDFGPRGITINVVQPGPIDTDAN. . . PANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMH
Query Conservation          
       
 

 
 

 
 
   ...                 
   




  
  
 
  
  


  
Alig confidence 































...












































Template Conservation          
       



 
 

 
 
                    

 
   




  
 

 
  
  


  
Template Sequence  LLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETV
Template Known Secondary structure  GGGT
SB
SSTTGGGG
ST
SS
B
GGGGTSGGGTT

S
Template Predicted Secondary structure 






































Template SS confidence 















































































   171........180.........190.........200.........210.........220.........230.........240.........250
 
   230.......
Predicted Secondary structure 





Query SS confidence 







Query Sequence  TIDGAFGA
Query Conservation   



   
Alig confidence 







Template Conservation   



   
Template Sequence  VVGGGTAS
Template Known Secondary structure  STT


Template Predicted Secondary structure 


Template SS confidence 







   251.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions