Job Description P39333 Confidence 100.00% Date Thu Jan 5 11:59:24 GMT 2012 Rank 64 Aligned Residues 225 % Identity 24% Template c2z1nA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase; PDBTitle: crystal structure of ape0912 from aeropyrum pernix k1 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	.	A	F	T	G	K	T	V	L	I	L	G	G	S	R	G	I	G	A	A	I	V	R	R	F	V	T	D	G	A	N	V	R	F	T	Y	A	G	S	K	D	A	A	K	R	L	A	Q	E	T	G	.	.	.	.	.	.	.	.	.	.	A	T	A	V	F	T	D	S	A	D	R	D	A	V	I	D	V
Query Conservation				.																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	D	L	G	I	Q	G	K	L	A	V	V	T	A	G	S	S	G	L	G	F	A	S	A	L	E	L	A	R	N	G	A	R	L	L	L	F	S	R	N	R	E	K	L	E	A	A	A	S	R	I	A	S	L	V	S	G	A	Q	V	D	I	V	A	G	D	I	R	E	P	G	D	I	D	R	L	F	E	K	A
Template Known Secondary structure							T	T							T	T	T	S													T	T								S																S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	K	S	G	A	L	D	I	L	V	V	N	A	G	I	G	V	F	G	E	A	L	E	L	N	A	D	D	I	D	R	L	F	K	I	N	I	H	A	P	Y	H	A	S	V	E	A	A	R	Q	M	P	E	G	G	R	I	L	I	I	G	S	V	N	G	D	R	M	P	V	A	G	M	A	A	Y	A	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	L	G	G	A	D	I	L	V	Y	S	T	G	G	P	R	P	G	R	F	M	E	L	G	V	E	D	W	D	E	S	Y	R	L	L	A	R	S	A	V	W	V	G	R	R	A	A	E	Q	M	V	E	K	G	W	G	R	M	V	Y	I	G	S	V	T	L	L	R	P	W	Q	D	L	A	L	S	N	I	M
Template Known Secondary structure				T	T			S												B		G	G	G													T																			T										G	G	G	T	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	A	L	Q	G	M	A	R	G	L	A	R	D	F	G	P	R	G	I	T	I	N	V	V	Q	P	G	P	I	D	T	D	A	N	P	A	N	G	P	M	R	D	M	L	H	S	L	M	A	I	K	R	H	G	Q	P	E	E	V	A	G	M	V	A	W	L	A	G	P	E	A	S	F	V	T	G	A	M	H
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	P	V	I	G	V	V	R	T	L	A	L	E	L	A	P	H	G	V	T	V	N	A	V	L	P	S	L	I	L	T	D	R	V	R	R	.	.	.	.	.	.	.	.	.	.	.	I	P	M	G	R	V	G	K	P	E	E	L	A	S	V	V	A	F	L	A	S	E	K	A	S	F	I	T	G	A	V	I
Template Known Secondary structure		T															G	G	G	T																			.	.	.	.	.	.	.	.	.	.	.		T	T	S	S															T	S	G	G	G	T	T			S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.												.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	D	G	A	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	D	G	G	A	H
Template Known Secondary structure				S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions