Job Description P39333 Confidence 98.81% Date Thu Jan 5 11:59:24 GMT 2012 Rank 229 Aligned Residues 222 % Identity 12% Template c2z1mC_ PDB info PDB header:lyase Chain: C: PDB Molecule:gdp-d-mannose dehydratase; PDBTitle: crystal structure of gdp-d-mannose dehydratase from aquifex aeolicus2 vf5 Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	T	V	L	I	L	G	G	S	R	G	I	G	A	A	I	V	R	R	F	V	T	D	G	A	N	V	R	F	T	Y	A	G	S	K	D	A	A	K	R	L	A	Q	E	T	G	A	T	A	V	F	T	D	S	A	D	R	D	A	V	I	D	V	V	R	K	S	G	A	L	D	I	L	V	V	N	A	G	I
Query Conservation
Alig confidence																																													.	.	.
Template Conservation																																													.	.	.
Template Sequence		G	K	R	A	L	I	T	G	I	R	G	Q	D	G	A	Y	L	A	K	L	L	L	E	K	G	Y	E	V	Y	G	A	D	S	W	R	L	K	E	L	G	I	E	N	.	.	.	D	V	K	I	I	H	M	D	L	L	E	F	S	N	I	I	R	T	I	E	K	V	Q	P	D	E	V	Y	N	L	A	A	Q	S
Template Known Secondary structure									T	T	T	S													T	T														T	T		T	T	.	.	.	T	S							T	T															S
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		G	V	F	G	E	A	L	E	L	N	A	D	D	I	D	R	L	F	K	I	N	I	H	A	P	Y	H	A	S	V	E	A	A	R	Q	M	P	E	G	G	R	I	L	I	I	G	S	V	N	G	.	.	.	.	D	R	M	P	V	A	G	M	A	A	Y	A	A	S	K	S	A	L	Q	G	M	A	R	G	L	A
Query Conservation																																																				.	.	.	.
Alig confidence																																																				.	.	.	.
Template Conservation
Template Sequence		F	V	G	V	S	F	E	Q	P	I	L	T	A	E	V	D	A	I	G	V	L	R	I	L	E	A	L	R	T	V	K	P	D	T	K	F	Y	Q	A	S	T	S	E	M	F	G	K	V	Q	E	I	P	Q	T	E	K	T	P	F	Y	P	R	S	P	Y	A	V	A	K	L	F	G	H	W	I	T	V	N	Y	R
Template Known Secondary structure									S									T															T	T									G	G	G	T		S		S	S	S	S	B		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.														.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	F	G	P	R	G	I	T	I	N	V	V	Q	P	G	P	I	D	T	D	A	N	P	A	N	G	P	M	R	D	M	L	H	S	L	M	A	I	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	Q	P	E	E	V	A	G	M	V	A	W	L	A	G	P	E	A	S	F	V	T	G	A	M
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		E	A	Y	N	M	F	A	C	S	G	I	L	F	N	H	E	S	P	L	R	G	I	E	F	V	T	R	K	I	T	Y	S	L	A	R	I	K	Y	G	L	Q	D	K	L	V	L	G	N	L	N	A	K	R	D	W	G	Y	A	P	E	Y	V	E	A	M	W	L	M	M	Q	Q	P	E	.	.	.	.	P	D	D
Template Known Secondary structure																			T	T	S		T	T	S														T	T	S		S					S		T	T																				T	S	S	S	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.
		229	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	I	D	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	I	A	T	G
Template Known Secondary structure					S		S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions