Job Description P39333 Confidence 99.06% Date Thu Jan 5 11:59:24 GMT 2012 Rank 220 Aligned Residues 211 % Identity 19% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

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		3	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure													.																			.																									.	.	.	.	.	.	.	.
Query SS confidence													.																			.																									.	.	.	.	.	.	.	.
Query Sequence		A	F	T	G	K	T	V	L	I	L	G	.	G	S	R	G	I	G	A	A	I	V	R	R	F	V	T	D	G	A	.	N	V	R	F	T	Y	A	G	S	K	D	A	A	K	R	L	A	Q	E	T	G	A	T	A	.	.	.	.	.	.	.	.	V	F	T	D	S	A	D	R	D	A	V	I	D	V	V	R	K
Query Conservation													.																			.																									.	.	.	.	.	.	.	.
Alig confidence													.																			.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	K	D	K	Y	V	L	I	T	G	A	G	K	G	S	I	G	A	E	V	L	Q	G	L	L	Q	G	G	A	K	V	V	V	T	T	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I	E	F
Template Known Secondary structure				T	T							S			S	S	S												T	T								S	S																			T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
		73	.																	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	D	I	L	V	V	N	A	G	I	G	V	F	G	E	A	L	E	L	N	A	D	D	I	D	R	L	F	K	I	N	I	H	A	P	Y	H	A	S	V	E	A	A	R	Q	M	P	E	G	G	R	I	L	I	I	G	S	V	N	G	D
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	D	T	E	K	N	G	G	L	G	W	D	L	D	A	I	I	P	F	A	A	I	P	E	Q	G	I	E	L	E	H	I	D	S	K	S	E	F	A	H	R	I	M	L	T	N	I	L	R	M	M	G	C	V	K	K	Q	K	S	A	R	G	I	E	T	R	P	A	Q	V	I	L	P	M	S	P	N	H	G
Template Known Secondary structure				S		T	T	T	T	S						S												S	B		G	G	G													T																T	T	T			S											S		T	T
Template Predicted Secondary structure
Template SS confidence
		752	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	P	V	A	G	M	A	A	Y	A	A	S	K	S	A	L	Q	G	M	A	R	G	L	A	R	D	F	G	P	R	G	I	T	I	N	V	V	Q	P	G	P	I	D	T	D	A	N	P	A	N	G	P	M	R	D	M	L	H	S	L	M	A	I	K	R	H	G	Q	P	E	E	V	A	G	M	V	A	W	L
Query Conservation
Alig confidence					.	.																																										.	.	.	.	.																		.
Template Conservation					.	.																																										.	.	.	.	.																		.
Template Sequence		T	F	G	.	.	G	D	G	M	Y	S	E	S	K	L	S	L	E	T	L	F	N	R	W	H	S	E	S	W	A	N	Q	L	T	V	C	G	A	I	I	G	W	T	R	G	T	.	.	.	.	.	N	N	I	I	A	E	G	I	E	K	M	G	V	R	T	F	S	.	Q	K	E	M	A	F	N	L	L	G	L
Template Known Secondary structure			S	S	.	.		B	T	T								G	G	G								S	S		T	T	T															.	.	.	.	.			T	T						T	T	T		B				.										G	G
Template Predicted Secondary structure					.	.																																										.	.	.	.	.																		.
Template SS confidence
		832	.	.			.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.						.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.		.	.	.	.	.	.	.	900	.	.	.
		217	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	P	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	P	E	V
Template Known Secondary structure		G	S
Template Predicted Secondary structure
Template SS confidence
		909	910	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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