Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank34Aligned Residues235
% Identity20%Templatec2p91A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:enoyl-[acyl-carrier-protein] reductase [nadh]; PDBTitle: crystal structure of enoyl-[acyl-carrier-protein] reductase (nadh)2 from aquifex aeolicus vf5
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10...... ...20.........30......... 40.........50.........60.........70......
Predicted Secondary structure 









..




...















Query SS confidence 














. .






















. . .




































Query Sequence  GAFTGKTVLILGGSR. . GIGAAIVRRFVTDGANVRFTYAG. . . SKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGAL
Query Conservation    
 









 ..


 


  

  

 
    
 ...                   
                 
Alig confidence 














..






















...




































Template Conservation    
 









   


 
 
  

  

 

   
                                         
Template Sequence  GLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN
Template Known Secondary structure 
TTTT



SSTTSTT
SSGGGTT




TT
Template Predicted Secondary structure 































Template SS confidence 















































































   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   77..80.........90 .........100.........110.........120.........130.........140........
Predicted Secondary structure 













........










































Query SS confidence 













. . . . . . . .

























































Query Sequence  DILVVNAGIGVFGE. . . . . . . . ALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAA
Query Conservation                ........                                         
                
Alig confidence 













........

























































Template Conservation                                                                  
               
Template Sequence  WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGI
Template Known Secondary structure  TS








GGGGSS
GGG

TGGGGTTS


GGGTS

TTTT
Template Predicted Secondary structure 
























































Template SS confidence 















































































   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   149150.........160.........170.........180.........190. ........200.........210.........220.......
Predicted Secondary structure 





















.















Query SS confidence 










































.



































Query Sequence  SKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMR. DMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGA
Query Conservation 

          
       
 

 
 

 
 
          .          
   




  
  
 
  
  


 
Alig confidence 










































.



































Template Conservation 

                  
 

 
 

 
 
                  

 
   
 


  
 

 
  
  


 
Template Sequence  AKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGE
Template Known Secondary structure  TTT





S


TTSTTSS


TSGGGTT

S
Template Predicted Secondary structure 












































Template SS confidence 















































































   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   228.230......
Predicted Secondary structure 




Query SS confidence 








Query Sequence  MHTIDGAFG
Query Conservation   
 



  
Alig confidence 








Template Conservation   
 



  
Template Sequence  VVHVDNGYH
Template Known Secondary structure  STTGG
Template Predicted Secondary structure 



Template SS confidence 








   259260.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions