Return to main results Retrieve Phyre Job Id

Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank137Aligned Residues229
% Identity25%Templatec2jahB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:clavulanic acid dehydrogenase; PDBTitle: biochemical and structural analysis of the clavulanic acid2 dehydeogenase (cad) from streptomyces clavuligerus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50... ......60.........70...
Predicted Secondary structure 

















........









Query SS confidence 



















































. . . . . . . .



















Query Sequence  GAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGA. . . . . . . . TAVFTDSADRDAVIDVVRKS
Query Conservation    
 









 


 


  

  

 
    
               ........     
              
Alig confidence 



















































........



















Template Conservation   

 

 






 


  

  
   
  

   
                                           
Template Sequence  SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL
Template Known Secondary structure 
TTTT
STTSTT
S
TT



TT
Template Predicted Secondary structure 
































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   74.....80.........90.........100.........110.........120.........130.........140.........150...
Predicted Secondary structure 



























































Query SS confidence 















































































Query Sequence  GALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSAL
Query Conservation                                                            
                

   
Alig confidence 















































































Template Conservation                                                         
   
            
  

 
 
Template Sequence  GGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGV
Template Known Secondary structure  S

S








STT

TT


GGGT


TT
Template Predicted Secondary structure 


























































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   154.....160.........170.........180...... ...190.........200.........210.........220.........230.
Predicted Secondary structure 




















..
















Query SS confidence 
































. .












































Query Sequence  QGMARGLARDFGPRGITINVVQPGPIDTDANPA. . NGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTI
Query Conservation         
       
 

 
 

 
 
     ..               
   




  
  
 
  
  


  
 
Alig confidence 
































..































.











Template Conservation         
      

 
  
 

 
 
                   
  
   




 
   
 
.         
 
Template Sequence  NAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIRKLQAQDIAEAVRYAVT. APHHATVHEIFI
Template Known Secondary structure  GGGT

SB
SSGGGG


TSSS

B
.S
TT



Template Predicted Secondary structure 



























.





Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220......... 230.........240.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions