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Job DescriptionP39333
Confidence100.00%DateThu Jan 5 11:59:24 GMT 2012
Rank55Aligned Residues235
% Identity29%Templatec1w4zA_
PDB info PDB header:antibiotic biosynthesisChain: A: PDB Molecule:ketoacyl reductase; PDBTitle: structure of actinorhodin polyketide (actiii) reductase
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.. .......60.........70....
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Query Sequence  AFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETG. . . . . . . . ATAVFTDSADRDAVIDVVRKSG
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Template Sequence  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG
Template Known Secondary structure 

SS
S
SSTT
S
TT



TT
T
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   75....80.........90.........100.........110.........120. ........130.........140.........150.
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Query Sequence  ALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQM. . . PEGGRILIIGSVNGDRMPVAGMAAYAASKS
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Template Sequence  PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH
Template Known Secondary structure  S
S






S
GGG

TTTTST


GGGTS

TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   152.......160.........170.........180..... ....190.........200.........210.........
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Query Sequence  ALQGMARGLARDFGPRGITINVVQPGPIDTDANP. . . . . . . . . . . . ANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGP
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Template Sequence  GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGP
Template Known Secondary structure  GGGT
SB
STT

TTSTTSS
B
TSG
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   220.........230.......
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Query Sequence  EASFVTGAMHTIDGAFGA
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Template Sequence  GAAAVTAQALNVCGGLGN
Template Known Secondary structure  GGTT

S
STT


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   243......250.........260
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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