Return to main results Retrieve Phyre Job Id

Job DescriptionP13039
Confidence95.82%DateThu Jan 5 11:33:32 GMT 2012
Rank266Aligned Residues84
% Identity14%Templated2f15a1
SCOP infoImmunoglobulin-like beta-sandwich E set domains AMPK-beta glycogen binding domain-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20....... ..30.........40.........50.........60.........70.........80
Predicted Secondary structure 










..

































Query SS confidence 
























. .




















































Query Sequence  EVTFWWRDPQGSEEYSTIKRVWVYI. . TGVTDHHQNSQPQSMQRIAGTNVWQWTTQLNANWRGSYCFIPTERDDIFSVPS
Query Conservation   





             
 
  ..    
         
 

 




  
   
   
  
               
Alig confidence 











........




..





......








..







.











.........
Template Conservation   
 
 
      ........
 
 
 
  
   ......  
    
 ..    
 
 . 
 
 






.........
Template Sequence  PTVIRWSEGGKE. . . . . . . . VFISGSFNNWSTK. . . . . . IPLIKSHND. . FVAILDLP. EGEHQYKFFVDG. . . . . . . . .
Template Known Secondary structure 
S

S
........GGGTT


......

SS
...STT.........
Template Predicted Secondary structure 




........






......




..

.



.........
Template SS confidence 















































































   78.80......... 90.........100.. .......110. ........ 120.........130.
 
   81........90.........100.........110.........120........
Predicted Secondary structure 









































Query SS confidence 















































Query Sequence  PDRLELREGWRKLLPQAIADPLNLQSWKGGRGHAVSALEMPQAPLQPG
Query Conservation                     

 

           
   

 
     
Alig confidence  ...............








.






















Template Conservation  ............... 
  

   .   
  
  



 
   
    
Template Sequence  . . . . . . . . . . . . . . . QWVHDPSEP. VVTSQLGTINNLIHVKKSDFEVF
Template Known Secondary structure  ...............

TTS
.
TTS



TTTT
Template Predicted Secondary structure  ...............




.












Template SS confidence 















































   132.......140 .........150.........160...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions