Job Description P13039 Confidence 99.83% Date Thu Jan 5 11:33:32 GMT 2012 Rank 49 Aligned Residues 202 % Identity 12% Template c3u0vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:lysophospholipase-like protein 1; PDBTitle: crystal structure analysis of human lyplal1 Resolution 1.72 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	W	I	F	T	T	G	D	A	T	A	E	E	R	P	L	A	V	L	L	D	G	E	F	W	A	Q	S	M	P	V	W	P	V	L	T	S	L	T	H	R	Q	Q	L	P	P	A	V	Y	V	L	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	D	T	T	H	R	A	H	E
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		Q	R	C	I	V	S	P	A	G	.	.	.	R	H	S	A	S	L	I	F	L	H	G	S	G	D	S	G	Q	G	L	R	M	W	I	K	Q	V	L	N	Q	D	L	T	F	Q	H	I	K	I	I	Y	P	T	A	P	P	R	S	Y	T	P	M	K	G	G	I	S	N	V	W	F	D	R	F	K	I	T	N	D
Template Known Secondary structure									S	S	.	.	.												T	T															T	S					S	S														G	G	G	T	T						S	S			S	S	S	S	S	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	C	N	A	D	F	W	L	A	V	Q	Q	E	L	L	P	L	V	K	A	I	A	P	F	S	D	R	A	D	R	T	V	V	A	G	Q	S	F	G	G	L	S	A	L	Y	A	G	L	H	W	P	E	R	F	G	C	V	L	S	Q	S	G	S	Y	W	W	P	H	R	G	G	Q	Q	E	G	V	L	L	E
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.
Template Sequence		C	P	E	H	L	E	S	I	D	V	M	C	Q	V	L	T	D	L	I	D	E	E	V	K	S	G	I	K	K	N	R	I	L	I	G	G	F	S	M	G	G	C	M	A	M	H	L	A	Y	R	N	H	Q	D	V	A	G	V	F	A	L	S	S	.	.	.	.	.	.	.	.	.	F	L	N	K	A	S	A	V
Template Known Secondary structure		S																								T	T			G	G	G							T															T	T	S	S						S		.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.										150	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																										.
Query SS confidence																											.																										.
Query Sequence		K	L	K	A	G	E	V	S	A	E	G	L	R	I	V	L	E	A	G	I	R	E	P	M	I	.	M	R	A	N	Q	A	L	Y	A	Q	L	H	P	I	K	E	S	I	F	W	R	Q	V	D	G	.	G	H	D	A	L	C	W	R	G	G	L	M	Q	G	L	I	D	L	W	Q	P	L
Query Conservation																											.																										.
Alig confidence																											.																										.					.	.
Template Conservation																																																										.	.
Template Sequence		Y	Q	A	L	Q	K	S	N	G	V	L	P	E	L	F	Q	C	H	G	T	A	D	E	L	V	L	H	S	W	A	E	E	T	N	S	M	L	K	S	L	G	V	T	T	K	F	H	S	F	P	N	V	Y	H	E	L	.	.	S	K	T	E	L	D	I	L	K	L	W	I	L	T	K	L
Template Known Secondary structure										S											T	T		S	S	S															T	T									T	T			S	S		.	.
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions