Job Description P13039 Confidence 98.90% Date Thu Jan 5 11:33:32 GMT 2012 Rank 160 Aligned Residues 195 % Identity 11% Template c3fleB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:se_1780 protein; PDBTitle: se_1780 protein of unknown function from staphylococcus epidermidis. Resolution 2.01 Å

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		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.																.	.	.	.	.	.	.	230
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	R	P	L	A	V	L	L	D	G	E	F	W	A	Q	S	M	P	V	W	P	V	L	T	S	L	T	H	R	Q	Q	L	P	P	A	V	Y	V	L	I	D	A	I	D	T	T	H	R	A	H	E	L	P	C	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	W	L	A	V	Q	Q
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.														.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.														.
Template Sequence		K	T	T	A	.	T	L	F	L	H	G	Y	G	G	S	E	R	S	.	E	T	F	X	V	K	Q	A	L	N	K	N	V	T	N	E	V	I	T	A	R	V	S	S	E	G	K	V	Y	F	D	K	K	L	S	A	A	N	P	I	V	K	V	E	F	K	D	N	K	N	G	N	F	K	E	N	A	Y	W	I	K
Template Known Secondary structure						.							T	T			G	G	G	.	G										T	T			S									T	T	S					S	S						S								S	S
Template Predicted Secondary structure						.														.
Template SS confidence
		44	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.																	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	L	P	L	V	K	A	I	A	P	F	S	D	R	A	D	R	T	V	V	A	G	Q	S	F	G	G	L	S	A	L	Y	A	G	L	H	W	P	E	R	.	.	.	.	.	F	G	C	V	L	S	Q	S	G	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	W	P	H	R	G	G
Query Conservation																																											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																												.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		E	V	L	S	Q	L	K	S	Q	F	.	.	.	.	G	I	Q	Q	F	N	F	V	G	H	S	X	G	N	X	S	F	A	F	Y	X	K	N	Y	G	D	D	R	H	L	P	Q	L	K	K	E	V	N	I	A	G	V	Y	N	G	I	L	N	X	N	E	N	V	N	E	I	I	V	D	K	Q	G	K	P	S	R
Template Known Secondary structure												.	.	.	.											T														T	T		T	T	S										S			T	T			B	T	T	T	B		T	T				B		S	S			B	S	S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.							.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.						.																				.	.							.
Query SS confidence																														.	.	.	.	.	.						.																				.	.							.
Query Sequence		Q	Q	E	G	V	L	L	E	K	L	K	A	G	E	V	S	A	E	G	L	R	I	V	L	E	A	G	I	.	.	.	.	.	.	R	E	P	M	I	.	M	R	A	N	Q	A	L	Y	A	Q	L	H	P	I	K	E	S	I	F	.	.	W	R	Q	V	D	G	.	G	H	D	A	L	C	W	R	G	G	L	M
Query Conservation																														.	.	.	.	.	.						.																				.	.							.
Alig confidence																														.	.	.	.	.	.						.																				.	.							.
Template Conservation
Template Sequence		X	N	A	A	Y	R	Q	L	L	S	L	Y	K	I	Y	C	G	K	E	I	E	V	L	N	I	Y	G	D	L	E	D	G	S	H	S	D	G	R	V	S	N	S	S	S	Q	S	L	Q	Y	L	L	R	G	S	T	K	S	Y	Q	E	X	K	F	K	G	A	K	A	Q	H	S	Q	L	H	E	N	K	D	V	A
Template Known Secondary structure								T	T	T	T	G	G	G	G	S	T	T	S													S	S	S	S	B	S	S	S	S	B						T							S			S									S	G	G	G	S	T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	L	I	D	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	I	I	Q	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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