Job Description P13039 Confidence 99.97% Date Thu Jan 5 11:33:32 GMT 2012 Rank 23 Aligned Residues 227 % Identity 9% Template c2qtbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dipeptidyl peptidase 4; PDBTitle: human dipeptidyl peptidase iv/cd26 in complex with a 4-aryl2 cyclohexylalanine inhibitor Resolution 2.25 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																														.																.	.	.	.
Query SS confidence																														.																.	.	.	.
Query Sequence		P	A	K	E	I	I	W	K	S	E	R	L	K	K	S	R	R	V	W	I	F	T	T	G	D	A	T	A	.	E	E	R	P	L	A	V	L	L	D	G	E	F	W	A	.	.	.	.	Q	S	M	P	V	W	P	V	L	T	S	L	T	H	R	Q	Q	L	P	P	A	V	Y	V	L	I	D	A	I	D	T	T
Query Conservation																														.																.	.	.	.
Alig confidence											.																			.																.	.	.	.																	.	.	.	.
Template Conservation											.																																																							.	.	.	.
Template Sequence		P	S	K	K	L	D	F	I	I	.	L	N	E	T	K	F	W	Y	Q	M	I	L	P	P	H	F	D	K	S	K	K	Y	P	L	L	L	D	V	Y	A	G	P	C	S	Q	K	A	D	T	V	F	R	L	N	W	A	T	Y	L	A	S	T	E	N	.	.	.	.	I	I	V	A	S	F	D	G	R	G	S	G
Template Known Secondary structure											.		T	T											T	T			T	T	S												T	T											S								T	T		.	.	.	.									T	T		S
Template Predicted Secondary structure											.																																																							.	.	.	.
Template SS confidence
		510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.					.	.	.	.	.	.	.	580	.	.	.	.
		213	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure								.	.																					.																																															.	.	.	.	.
Query SS confidence								.	.																					.																																															.	.	.	.	.
Query Sequence		H	R	A	H	E	L	.	.	P	C	N	A	D	F	W	L	A	V	Q	Q	E	L	L	P	L	V	K	A	.	I	A	P	F	S	D	R	A	D	R	T	V	V	A	G	Q	S	F	G	G	L	S	A	L	Y	A	G	L	H	W	P	E	R	F	G	C	V	L	S	Q	S	G	S	Y	W	W	.	.	.	.	.
Query Conservation								.	.																					.																																															.	.	.	.	.
Alig confidence								.	.																					.																																															.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	G	D	K	I	M	H	A	I	N	R	R	L	G	T	F	E	V	E	D	Q	I	E	A	A	R	Q	F	S	K	M	G	F	V	D	N	K	R	I	A	I	W	G	W	S	Y	G	G	Y	V	T	S	M	V	L	G	S	G	S	G	V	F	K	C	G	I	A	V	A	P	V	S	R	W	E	Y	Y	D	S
Template Known Secondary structure		S	S						G	G	G	T	T		T	T	S															T	T	S	S												T											T	T	T		S			S						S					G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
										285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																								.																.																										.						.
Query SS confidence		.	.	.	.	.	.	.	.																								.																.																										.						.
Query Sequence		.	.	.	.	.	.	.	.	P	H	R	G	G	Q	Q	E	G	V	L	L	E	K	L	K	A	G	E	V	S	A	E	.	G	L	R	I	V	L	E	A	G	I	R	E	P	M	I	.	M	R	A	N	Q	A	L	Y	A	Q	L	H	P	I	K	E	S	I	F	W	R	Q	V	D	G	.	G	H	D	A	L	.
Query Conservation		.	.	.	.	.	.	.	.																								.																.																										.						.
Alig confidence		.	.	.	.	.	.	.	.																								.																.																										.						.
Template Conservation
Template Sequence		V	Y	T	E	R	Y	M	G	L	P	T	P	E	D	N	L	D	H	Y	R	N	S	T	V	M	S	R	A	E	N	F	K	Q	V	E	Y	L	L	I	H	G	T	A	D	D	N	V	H	F	Q	Q	S	A	Q	I	S	K	A	L	V	D	V	G	V	D	F	Q	A	M	W	Y	T	D	E	D	H	G	I	A	S
Template Known Secondary structure											S	S	T	T	T	T							S		S	G	G	G	G	G	G	G	G	G	S								T	T		S	S	S		T													T	T									T	T			T	T			S
Template Predicted Secondary structure
Template SS confidence
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.
				353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	C	W	R	G	G	L	M	Q	G	L	I	D	L	W	Q	P	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		S	T	A	H	Q	H	I	Y	T	H	M	S	H	F	I	K	Q	C	F
Template Known Secondary structure																				T
Template Predicted Secondary structure
Template SS confidence
		745	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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