Job Description P13039 Confidence 70.92% Date Thu Jan 5 11:33:32 GMT 2012 Rank 285 Aligned Residues 83 % Identity 18% Template c2qlvB_ PDB info PDB header:transferase/protein binding Chain: B: PDB Molecule:protein sip2; PDBTitle: crystal structure of the heterotrimer core of the s.2 cerevisiae ampk homolog snf1 Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		M	F	E	V	T	F	W	W	R	D	P	Q	G	S	E	E	Y	S	T	I	K	R	V	W	V	Y	I	.	.	T	G	V	T	D	H	H	Q	N	S	Q	P	Q	S	M	Q	R	I	A	G	T	N	V	W	Q	W	T	T	Q	L	N	A	N	W	R	G	S	Y	C	F	I	P	T	E	R	D	D	I	F	S	V
Query Conservation																													.	.
Alig confidence																.	.	.	.	.	.	.	.						.	.								.	.	.	.	.																					.																.	.	.
Template Conservation																.	.	.	.	.	.	.	.															.	.	.	.	.																					.																.	.	.
Template Sequence		M	V	P	V	E	I	R	W	Q	Q	G	G	S	K	.	.	.	.	.	.	.	.	V	Y	V	T	G	S	F	T	K	W	R	K	M	I	.	.	.	.	.	G	L	I	P	D	S	D	N	N	G	S	F	H	V	K	L	R	L	L	P	.	G	T	H	R	F	R	F	I	V	D	N	E	L	R	V	.	.	.
Template Known Secondary structure											S			S		.	.	.	.	.	.	.	.						G	G	G	T	T	S	S			.	.	.	.	.						S	S	S	T	T										S	.										T	T					.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.															.	.	.	.	.																					.																.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	P	D	R	L	E	L	R	E	G	W	R	K	L	L	P	Q	A	I	A	D	P	L	N	L	Q	S	W	K	G	G	R	G	H	A	V	S	A	L	E	M	P	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	F	L	P	.	T	A	T	D	Q	M	G	N	F	V	N	Y	I	E	V	R	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S		.					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template SS confidence
																							226	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions