Job Description P13039 Confidence 98.16% Date Thu Jan 5 11:33:32 GMT 2012 Rank 214 Aligned Residues 210 % Identity 14% Template c2ockA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:valacyclovir hydrolase; PDBTitle: crystal structure of valacyclovir hydrolase d123n mutant Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	K	E	I	I	W	K	S	E	R	L	K	K	S	R	R	V	W	I	F	T	T	G	D	A	T	A	E	E	R	P	L	A	V	L	L	D	G	E	F	W	A	Q	S	M	P	V	W	P	V	L	T	S	L	T	H	R	Q	Q	L	P	P	A	V	Y	V	L	I	D	A	I	D	T	T	H	R	A	H	E
Query Conservation
Alig confidence											.	.															.	.	.	.	.	.																													.	.	.	.
Template Conservation											.	.															.	.	.	.	.	.																													.	.	.	.
Template Sequence		S	V	T	S	A	K	V	A	V	.	.	N	G	V	Q	L	H	Y	Q	Q	T	G	E	G	D	.	.	.	.	.	.	H	A	V	L	L	L	P	G	M	L	G	S	G	E	T	D	F	G	P	Q	L	K	N	L	N	K	K	L	.	.	.	.	F	T	V	V	A	W	D	P	R	G	Y	G	H	S	R	P	P
Template Known Secondary structure											.	.	T	T												S	.	.	.	.	.	.									T	T														S		T	T	T	.	.	.	.									T	T	S	T	T			S	S
Template Predicted Secondary structure											.	.															.	.	.	.	.	.																													.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	C	N	A	D	F	W	L	A	V	Q	Q	E	L	L	P	L	V	K	A	I	A	P	F	S	D	R	A	D	R	T	V	V	A	G	Q	S	F	G	G	L	S	A	L	Y	A	G	L	H	W	P	E	R	F	G	C	V	L	S	Q	S	G	S	Y	W	W	P	H	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.
Template Sequence		D	R	D	F	P	A	D	F	F	E	R	D	A	K	D	A	V	D	L	M	K	A	L	K	F	K	K	V	.	.	.	.	S	L	L	G	W	S	N	G	G	I	T	A	L	I	A	A	A	K	Y	P	S	Y	I	H	K	M	V	I	W	G	A	N	A	Y	V	T	D	E	D	S	M	I	Y	E	G	I	R	D
Template Known Secondary structure							T	T																T	T		S	S		.	.	.	.						T														T	T	T								S			S	B													S
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
																																287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	G	Q	Q	E	G	V	L	L	E	K	L	K	A	G	E	V	S	A	E	G	L	R	I	V	L	E	A	G	I	R	E	P	M	I	.	M	R	A	N	Q	A	L	Y	A	Q	L	H	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.													.
Template Conservation																																																																																	.
Template Sequence		V	S	K	W	S	E	R	T	R	K	P	L	E	A	L	Y	G	Y	D	Y	F	A	R	T	C	E	K	W	V	D	G	I	R	Q	F	K	H	L	P	D	G	N	I	C	R	H	L	L	P	R	V	Q	C	P	A	L	I	V	H	G	E	K	D	P	L	V	P	R	F	H	A	D	F	I	H	K	H	V	K	.
Template Known Secondary structure		G	G	G	S																														G	G	G	G	S	G	G	G	B	S	S	T	T	T	G	G	G			S								T	T		S	S	S												S	T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.		.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure														.				.
Query SS confidence														.				.
Query Sequence		I	K	E	S	I	F	W	R	Q	V	D	G	.	G	H	D	.	A	L	C	W	R	G	G	L	M	Q	G	L	I	D	L	W	Q
Query Conservation														.				.
Alig confidence		.	.	.										.				.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	S	R	L	H	L	M	P	E	G	K	H	N	L	H	L	R	F	A	D	E	F	N	K	L	A	E	D	F	L	Q
Template Known Secondary structure		.	.	.	T							T	T			T	T					T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions