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Job DescriptionP13039
Confidence99.97%DateThu Jan 5 11:33:32 GMT 2012
Rank26Aligned Residues223
% Identity15%Templatec2hu7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acylamino-acid-releasing enzyme; PDBTitle: binding of inhibitors by acylaminoacyl peptidase
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160.........170......... 180.........190.........200.........210.....
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Query Sequence  IPAKEIIWKSERLKKSRRVWIFTTGDATAEERPLAVLLDGEFW. AQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRA
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Template Sequence  AGSRLVWVES. FDGSRVPTYVLESGRAP. TPGPTVVLVHGGPFAEDSDSWDTFAASLAAAG. . . . FHVVMPNYRGSTGYG
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   331........340 .........350....... ..360.........370.........380......... 390.........400....
 
   216.. .220.........230.........240.........250.........260.........270.........280....
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Query Sequence  HEL. . PCNADFWLAVQQELLPLVKAIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWW. . . . . . . . .
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Template Sequence  EEWRLKIIGDPCGGELEDVSAAARWARESG. LASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDA
Template Known Secondary structure  TTTT
TTTTT.
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   405....410.........420.........430.... .....440.........450.........460.........470.........480...
 
   285....290.........300.........310.........320.. .......330.........340....... ..350......
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Query Sequence  . . . . . . PHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMI. MRANQALYAQLHPIKESIFWRQVDG. GHDALCWRG
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Template Sequence  AFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMED
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   484.....490.........500.........510.........520.........530.........540.........550.........560...
 
   357..360.......
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Query Sequence  GLMQGLIDLWQ
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Template Sequence  . AVKILLPAVF
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   564.....570...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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