Job Description P13039 Confidence 99.97% Date Thu Jan 5 11:33:32 GMT 2012 Rank 22 Aligned Residues 309 % Identity 12% Template c2eepA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl aminopeptidase iv, putative; PDBTitle: prolyl tripeptidyl aminopeptidase complexed with an inhibitor Resolution 2.20 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	D	H	H	Q	N	S	Q	P	Q	S	M	Q	R	I	A	G	T	N	V	W	Q	W	T	T	Q	L	N	A	N	W	R	G	S	Y	C	F	I	P	T	E	R	D	D	I	F	S	V	P	S	P	D	R	L	E	L	R	E	G	W	R	K	L	L	P	Q	A	I	A	D	P	L	N	L	Q	S	W	K	G
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.
Template Sequence		V	T	K	G	E	W	E	V	T	N	F	A	G	F	D	P	K	G	T	R	L	Y	F	E	S	T	E	A	S	P	L	E	R	H	F	Y	C	I	D	I	K	G	G	K	T	K	D	L	T	P	E	S	G	M	H	R	T	Q	L	S	.	.	.	.	.	.	.	.	.	P	D	G	S	A	I	I	D	I	F	Q
Template Known Secondary structure			S		S	S	S										T	T	S								S	S	S		T	T		B							T	T							S			S	S	S								.	.	.	.	.	.	.	.	.	S	S	S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.										.	.	.	.	440	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																										.																				.	.	.	.
Query SS confidence																																																										.																				.	.	.	.
Query Sequence		G	R	G	H	A	V	S	A	L	E	M	P	Q	A	P	L	Q	P	G	W	D	C	P	Q	A	P	E	I	P	A	K	E	I	I	W	K	S	E	R	L	K	K	S	R	R	V	W	I	F	T	T	G	D	A	T	A	.	E	E	R	P	L	A	V	L	L	D	G	E	F	W	A	Q	S	M	P	.	.	.	.
Query Conservation																																																										.																				.	.	.	.
Alig confidence																																																										.																				.	.	.	.
Template Conservation
Template Sequence		S	P	T	V	P	R	K	V	T	V	T	N	I	G	K	G	S	H	T	L	L	E	A	K	N	A	M	P	E	I	R	T	G	T	I	M	A	A	D	G	Q	T	P	L	Y	Y	K	L	T	M	P	L	H	F	D	P	A	K	K	Y	P	V	I	V	Y	V	Y	G	G	P	H	A	Q	L	V	T	K	T	W	R
Template Known Secondary structure			S	S		S								T	T	S																							T	T	S	S	S										T	T			T	T	S												T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																				.	.																					.
Query SS confidence																																				.	.																					.
Query Sequence		V	W	P	V	L	T	S	L	T	H	R	Q	Q	L	P	P	A	V	Y	V	L	I	D	A	I	D	T	T	H	R	A	H	E	L	.	.	P	C	N	A	D	F	W	L	A	V	Q	Q	E	L	L	P	L	V	K	A	.	I	A	P	F	S	D	R	A	D	R	T	V	V	A	G	Q	S	F	G	G	L	S	A
Query Conservation																																				.	.																					.
Alig confidence														.	.	.	.																			.	.																					.
Template Conservation														.	.	.	.
Template Sequence		V	G	G	W	D	I	Y	M	A	Q	K	G	.	.	.	.	Y	A	V	F	T	V	D	S	R	G	S	A	N	R	G	A	A	F	E	Q	V	I	H	R	R	L	G	Q	T	E	M	A	D	Q	M	C	G	V	D	F	L	K	S	Q	S	W	V	D	A	D	R	I	G	V	H	G	W	S	Y	G	G	F	M	T
Template Known Secondary structure			T	T								T	T	.	.	.	.									T	T		S	S	S							T	T	T	T		T	T																T	S	T	T												T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.					.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.												.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.																																			.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.																																			.
Query Sequence		L	Y	A	G	L	H	W	P	E	R	F	G	C	V	L	S	Q	S	G	S	Y	W	W	P	H	R	G	.	.	.	.	.	.	.	.	.	.	.	G	Q	Q	E	G	V	L	L	E	K	L	K	A	G	E	V	S	A	E	G	L	R	I	V	L	E	A	G	I	R	E	P	M	I	.	M	R	A	N	Q	A	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.																																			.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation
Template Sequence		T	N	L	M	L	T	H	G	D	V	F	K	V	G	V	A	G	G	P	V	I	D	W	N	R	Y	E	I	M	Y	G	E	R	Y	F	D	A	P	Q	E	N	P	E	G	Y	D	A	A	N	L	L	K	R	A	G	D	L	K	G	R	L	M	L	I	H	G	A	I	D	P	V	V	V	W	Q	H	S	L	L	F
Template Known Secondary structure								S	T	T	T								S					G	G	G	S	B											T	T	T										G	G	G	G	G	G	G			S								T	T		S	S	S		T
Template Predicted Secondary structure
Template SS confidence
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		Y	A	Q	L	H	P	I	K	E	S	I	F	W	R	Q	V	D	G	.	G	H	D	A
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		L	D	A	C	V	K	A	R	T	Y	P	D	Y	Y	V	Y	P	S	H	E	H	N	V
Template Known Secondary structure									T									T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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